Proteomic Analysis

Peptides and proteins identified by re-processing the raw mass-spectrometry data of every proteomic dataset with a single documented pipeline (Comet 2026.01 against the CnidoSite reference proteome plus cRAP contaminants, with Percolator target-decoy FDR control). Search parameters are dataset-specific and are shown in full for each dataset; peptides were mapped onto CnidoSite gene models, so every row links to its gene page.

Dataset
Contaminants

Dataset provenance & search parameters — PXD051329

SpeciesExaiptasia diaphana
TissueCyst structure
PRIDE accessionPXD051329
Statusreprocessed
Search engineComet 2026.01
Reference proteomeCnidoSite reference proteome
Enzymetrypsin
Missed cleavages2
Precursor tolerance10 ppm
Fragment tolerance0.02 Da
Fixed modificationC+57.021464
Variable modificationM+15.9949
Decoy strategyComet internal reversed (1:1)
FDR (PSM)0.01
Quantificationspectral counting (PSMs)
Proteins298
Peptides (q≤0.01)878
PSMs (q≤0.01)14764
reprocessed against the CnidoSite reference proteome
20 cRAP contaminant protein s (keratins, trypsin, serum albumin …) were identified in this dataset and are excluded from the table below. Tick “include cRAP contaminants” to display them.
Gene Protein PSMs Unique peptides Coverage (%) Length Best q-value Description
KXJ19433.1 EDIAP_KXJ19433.1 58 5 7.8 676 0.00148368 hypothetical protein AC249_AIPGENE12481, partial [Exaiptasia diaphana]
KXJ15977.1 EDIAP_KXJ15977.1 51 5 13.7 328 0.00148368 MORN repeat-containing protein 3 [Exaiptasia diaphana]
KXJ11809.1 EDIAP_KXJ11809.1 48 5 23.9 238 0.00148368 Calcium-dependent secretion activator 1 [Exaiptasia diaphana]
KXJ22859.1 EDIAP_KXJ22859.1 153 4 21.1 95 0.00148368 CCR4-NOT transcription complex subunit 7 [Exaiptasia diaphana]
KXJ09142.1 EDIAP_KXJ09142.1 86 4 10.5 478 0.00148368 hypothetical protein AC249_AIPGENE15663 [Exaiptasia diaphana]
KXJ26277.1 EDIAP_KXJ26277.1 59 4 6.8 482 0.00148368 Protein eva-1-like C [Exaiptasia diaphana]
KXJ24966.1 EDIAP_KXJ24966.1 49 4 7.7 414 0.00148368 Ras-related protein Rab6 [Exaiptasia diaphana]
KXJ27095.1 EDIAP_KXJ27095.1 48 4 20.6 218 0.00148368 Alpha,alpha-trehalose-phosphate synthase [UDP-forming] [Exaiptasia diaphana]
KXJ27720.1 EDIAP_KXJ27720.1 36 4 9.1 559 0.00148368 hypothetical protein AC249_AIPGENE16847 [Exaiptasia diaphana]
KXJ12898.1 EDIAP_KXJ12898.1 32 4 8.9 406 0.00148368 Retrovirus-related Pol polyprotein from transposon 17.6 [Exaiptasia diaphana]
KXJ12378.1 EDIAP_KXJ12378.1 30 4 12 234 0.00148368 14-3-3-like protein 2 [Exaiptasia diaphana]
KXJ15888.1 EDIAP_KXJ15888.1 24 4 26.6 184 0.00148368 Gamma-glutamyltranspeptidase 1 [Exaiptasia diaphana]
KXJ10865.1 EDIAP_KXJ10865.1 104 3 6.5 449 0.00148368 hypothetical protein AC249_AIPGENE9557 [Exaiptasia diaphana]
KXJ06517.1 EDIAP_KXJ06517.1 48 3 38.9 95 0.00148368 Nucleolar protein 11 [Exaiptasia diaphana]
KXJ12185.1 EDIAP_KXJ12185.1 48 3 7.7 428 0.00148368 Glutathione peroxidase 1 [Exaiptasia diaphana]
KXJ25385.1 EDIAP_KXJ25385.1 47 3 2.8 872 0.00148368 Rab GDP dissociation inhibitor beta [Exaiptasia diaphana]
KXJ27909.1 EDIAP_KXJ27909.1 39 3 4.2 360 0.00148368 putative transferase CAF17-like, mitochondrial [Exaiptasia diaphana]
KXJ14632.1 EDIAP_KXJ14632.1 36 3 6.6 717 0.00148368 Transcription factor LBX1 [Exaiptasia diaphana]
KXJ17769.1 EDIAP_KXJ17769.1 34 3 1.8 1923 0.00148368 Pecanex-like protein 1 [Exaiptasia diaphana]
KXJ06222.1 EDIAP_KXJ06222.1 32 3 10 331 0.00148368 Protein NLRC5, partial [Exaiptasia diaphana]
KXJ18207.1 EDIAP_KXJ18207.1 32 3 10.2 440 0.00148368 hypothetical protein AC249_AIPGENE20372 [Exaiptasia diaphana]
KXJ11612.1 EDIAP_KXJ11612.1 30 3 16.3 215 0.00148368 hypothetical protein AC249_AIPGENE10558 [Exaiptasia diaphana]
KXJ13480.1 EDIAP_KXJ13480.1 29 3 25.7 179 0.00148368 hypothetical protein AC249_AIPGENE13587 [Exaiptasia diaphana]
KXJ23156.1 EDIAP_KXJ23156.1 29 3 6.6 621 0.00148368 Protein Flattop-like [Exaiptasia diaphana]
KXJ23303.1 EDIAP_KXJ23303.1 29 3 4.9 831 0.00148368 hypothetical protein AC249_AIPGENE6160 [Exaiptasia diaphana]
Total protein records: 298  (+20 contaminants hidden)
Show: proteins per page
« First ‹ Previous 1 2 3 4 5 12 Next › Last » of 12 pages
TOP