Proteomic Analysis

Peptides and proteins identified by re-processing the raw mass-spectrometry data of every proteomic dataset with a single documented pipeline (Comet 2026.01 against the CnidoSite reference proteome plus cRAP contaminants, with Percolator target-decoy FDR control). Search parameters are dataset-specific and are shown in full for each dataset; peptides were mapped onto CnidoSite gene models, so every row links to its gene page.

Dataset
Contaminants

Dataset provenance & search parameters — PXD051329

SpeciesExaiptasia diaphana
TissueCyst structure
PRIDE accessionPXD051329
Statusreprocessed
Search engineComet 2026.01
Reference proteomeCnidoSite reference proteome
Enzymetrypsin
Missed cleavages2
Precursor tolerance10 ppm
Fragment tolerance0.02 Da
Fixed modificationC+57.021464
Variable modificationM+15.9949
Decoy strategyComet internal reversed (1:1)
FDR (PSM)0.01
Quantificationspectral counting (PSMs)
Proteins298
Peptides (q≤0.01)878
PSMs (q≤0.01)14764
reprocessed against the CnidoSite reference proteome
20 cRAP contaminant protein s (keratins, trypsin, serum albumin …) were identified in this dataset and are excluded from the table below. Tick “include cRAP contaminants” to display them.
Gene Protein PSMs Unique peptides Coverage (%) Length Best q-value Description
KXJ29598.1 EDIAP_KXJ29598.1 29 3 26.4 163 0.00148368 Carnitine O-acetyltransferase [Exaiptasia diaphana]
KXJ15304.1 EDIAP_KXJ15304.1 26 3 20.5 151 0.00148368 Proteasome subunit alpha type-2 [Exaiptasia diaphana]
KXJ09844.1 EDIAP_KXJ09844.1 23 3 6.3 430 0.00148368 Transmembrane protein 98 [Exaiptasia diaphana]
KXJ15969.1 EDIAP_KXJ15969.1 23 3 15.5 206 0.00148368 Ankyrin-2 [Exaiptasia diaphana]
KXJ08359.1 EDIAP_KXJ08359.1 18 3 0.9 4565 0.00148368 putative global transcription activator SNF2L2 [Exaiptasia diaphana]
KXJ09372.1 EDIAP_KXJ09372.1 12 3 11.1 359 0.00148368 putative pyridoxal 5'-phosphate synthase subunit PDX2 [Exaiptasia diaphana]
KXJ20344.1 EDIAP_KXJ20344.1 7 3 2.4 1682 0.00148368 Alpha-tubulin N-acetyltransferase [Exaiptasia diaphana]
KXJ26611.1 EDIAP_KXJ26611.1 217 2 8 376 0.00148368 Hepatocyte growth factor-regulated tyrosine kinase substrate [Exaiptasia diaphana]
KXJ11695.1 EDIAP_KXJ11695.1 86 2 3.7 376 0.00148368 EKC/KEOPS complex subunit TPRKB [Exaiptasia diaphana]
KXJ16951.1 EDIAP_KXJ16951.1 79 2 2.9 594 0.00148368 Major facilitator superfamily domain-containing protein 6 [Exaiptasia diaphana]
KXJ26470.1 EDIAP_KXJ26470.1 72 2 7.3 234 0.00148368 V-type proton ATPase 16 kDa proteolipid subunit [Exaiptasia diaphana]
KXJ24578.1 EDIAP_KXJ24578.1 57 2 3.1 895 0.00148368 Zinc finger protein 84 [Exaiptasia diaphana]
KXJ26464.1 EDIAP_KXJ26464.1 50 2 9.5 348 0.00148368 Carbonic anhydrase 7 [Exaiptasia diaphana]
KXJ21843.1 EDIAP_KXJ21843.1 49 2 10.9 119 0.00148368 polymerase delta-interacting protein 2 [Exaiptasia diaphana]
KXJ09728.1 EDIAP_KXJ09728.1 47 2 3.8 791 0.00148368 Myosin-M heavy chain [Exaiptasia diaphana]
KXJ14449.1 EDIAP_KXJ14449.1 43 2 6.4 407 0.00148368 SprT-like domain-containing protein Spartan [Exaiptasia diaphana]
KXJ19032.1 EDIAP_KXJ19032.1 39 2 11.6 232 0.00148368 E3 ubiquitin-protein ligase MIB2 [Exaiptasia diaphana]
KXJ20470.1 EDIAP_KXJ20470.1 38 2 5.6 324 0.00148368 Regulator of microtubule dynamics protein 1 [Exaiptasia diaphana]
KXJ23986.1 EDIAP_KXJ23986.1 38 2 3.3 1061 0.00148368 hypothetical protein AC249_AIPGENE180 [Exaiptasia diaphana]
KXJ12873.1 EDIAP_KXJ12873.1 37 2 15.5 110 0.00148368 Failed axon connections-like [Exaiptasia diaphana]
KXJ22448.1 EDIAP_KXJ22448.1 37 2 5.8 189 0.00148368 AN1-type zinc finger protein 2B [Exaiptasia diaphana]
KXJ16823.1 EDIAP_KXJ16823.1 36 2 8.4 154 0.00148368 Uncharacterized protein KIAA1958 [Exaiptasia diaphana]
KXJ18821.1 EDIAP_KXJ18821.1 36 2 14.5 166 0.00148368 Uncharacterized protein KIAA2026 [Exaiptasia diaphana]
KXJ13643.1 EDIAP_KXJ13643.1 32 2 20.1 154 0.00148368 Endophilin-A1 [Exaiptasia diaphana]
KXJ11830.1 EDIAP_KXJ11830.1 30 2 9.1 242 0.00148368 Transketolase [Exaiptasia diaphana]
Total protein records: 298  (+20 contaminants hidden)
Show: proteins per page
« First ‹ Previous 1 2 3 4 5 6 12 Next › Last » of 12 pages
TOP