Proteomic Analysis

Peptides and proteins identified by re-processing the raw mass-spectrometry data of every proteomic dataset with a single documented pipeline (Comet 2026.01 against the CnidoSite reference proteome plus cRAP contaminants, with Percolator target-decoy FDR control). Search parameters are dataset-specific and are shown in full for each dataset; peptides were mapped onto CnidoSite gene models, so every row links to its gene page.

Dataset
Contaminants

Dataset provenance & search parameters — PXD051329

SpeciesExaiptasia diaphana
TissueCyst structure
PRIDE accessionPXD051329
Statusreprocessed
Search engineComet 2026.01
Reference proteomeCnidoSite reference proteome
Enzymetrypsin
Missed cleavages2
Precursor tolerance10 ppm
Fragment tolerance0.02 Da
Fixed modificationC+57.021464
Variable modificationM+15.9949
Decoy strategyComet internal reversed (1:1)
FDR (PSM)0.01
Quantificationspectral counting (PSMs)
Proteins298
Peptides (q≤0.01)878
PSMs (q≤0.01)14764
reprocessed against the CnidoSite reference proteome
20 cRAP contaminant protein s (keratins, trypsin, serum albumin …) were identified in this dataset and are excluded from the table below. Tick “include cRAP contaminants” to display them.
Gene Protein PSMs Unique peptides Coverage (%) Length Best q-value Description
KXJ09059.1 EDIAP_KXJ09059.1 21 1 3.7 296 0.00148368 Zinc finger protein 75D [Exaiptasia diaphana]
KXJ14947.1 EDIAP_KXJ14947.1 20 1 3.7 298 0.003663 Uncharacterized protein C16orf52-like [Exaiptasia diaphana]
KXJ16363.1 EDIAP_KXJ16363.1 19 1 1.9 426 0.00696056 Calcium-responsive transcription coactivator [Exaiptasia diaphana]
KXJ20034.1 EDIAP_KXJ20034.1 19 1 2.4 507 0.00148368 hypothetical protein AC249_AIPGENE17899 [Exaiptasia diaphana]
KXJ28435.1 EDIAP_KXJ28435.1 19 1 2.1 429 0.00148368 hypothetical protein AC249_AIPGENE23263 [Exaiptasia diaphana]
KXJ08372.1 EDIAP_KXJ08372.1 18 1 1.5 739 0.00148368 Ragulator complex protein LAMTOR2 [Exaiptasia diaphana]
KXJ17086.1 EDIAP_KXJ17086.1 18 1 1.6 679 0.003663 C-Myc-binding protein [Exaiptasia diaphana]
KXJ12376.1 EDIAP_KXJ12376.1 17 1 7.3 193 0.00148368 Transposon Ty3-I Gag-Pol polyprotein [Exaiptasia diaphana]
KXJ05557.1 EDIAP_KXJ05557.1 16 1 6.7 149 0.00148368 Vesicular inhibitory amino acid transporter, partial [Exaiptasia diaphana]
KXJ16479.1 EDIAP_KXJ16479.1 16 1 8.8 148 0.00148368 Disrupted in renal carcinoma protein 2-like [Exaiptasia diaphana]
KXJ29074.1 EDIAP_KXJ29074.1 16 1 5.4 296 0.00148368 Organic cation transporter protein [Exaiptasia diaphana]
KXJ09149.1 EDIAP_KXJ09149.1 15 1 1.4 794 0.00696056 Prostamide/prostaglandin F synthase [Exaiptasia diaphana]
KXJ13558.1 EDIAP_KXJ13558.1 15 1 2.7 525 0.00148368 PIN2/TERF1-interacting telomerase inhibitor 1 [Exaiptasia diaphana]
KXJ26265.1 EDIAP_KXJ26265.1 15 1 2.5 320 0.003663 Protein fem-1-like B [Exaiptasia diaphana]
KXJ29323.1 EDIAP_KXJ29323.1 15 1 5.4 185 0.00148368 Low-density lipoprotein receptor-related protein 6 [Exaiptasia diaphana]
KXJ14801.1 EDIAP_KXJ14801.1 14 1 5.4 204 0.00148368 Protein HEG-like 1 [Exaiptasia diaphana]
KXJ17776.1 EDIAP_KXJ17776.1 14 1 2 543 0.00148368 Solute carrier family 35 member G1 [Exaiptasia diaphana]
KXJ19218.1 EDIAP_KXJ19218.1 14 1 4.9 243 0.00148368 COBW domain-containing protein 1 [Exaiptasia diaphana]
KXJ19506.1 EDIAP_KXJ19506.1 14 1 5.8 154 0.00148368 Spermatogenesis-associated protein 4 [Exaiptasia diaphana]
KXJ20949.1 EDIAP_KXJ20949.1 14 1 13.6 88 0.00148368 Alpha/beta hydrolase domain-containing protein 14A [Exaiptasia diaphana]
KXJ23144.1 EDIAP_KXJ23144.1 14 1 2.4 695 0.00148368 Transmembrane protein 208 [Exaiptasia diaphana]
KXJ26570.1 EDIAP_KXJ26570.1 14 1 0.5 1944 0.00148368 [Protein ADP-ribosylarginine] hydrolase [Exaiptasia diaphana]
KXJ28753.1 EDIAP_KXJ28753.1 14 1 0.9 1675 0.00148368 Potassium channel subfamily K member 10 [Exaiptasia diaphana]
KXJ28884.1 EDIAP_KXJ28884.1 14 1 6.7 208 0.00148368 Histone-lysine N-methyltransferase PRDM9 [Exaiptasia diaphana]
KXJ11757.1 EDIAP_KXJ11757.1 13 1 8.9 124 0.00148368 Cyclin-dependent kinase inhibitor 1B [Exaiptasia diaphana]
Total protein records: 298  (+20 contaminants hidden)
Show: proteins per page
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