Peptides and proteins identified by re-processing the raw mass-spectrometry data of every proteomic dataset with a single documented pipeline (Comet 2026.01 against the CnidoSite reference proteome plus cRAP contaminants, with Percolator target-decoy FDR control). Search parameters are dataset-specific and are shown in full for each dataset; peptides were mapped onto CnidoSite gene models, so every row links to its gene page.
| Gene | Protein | PSMs | Unique peptides | Coverage (%) | Length | Best q-value | Description |
|---|---|---|---|---|---|---|---|
| TRINITY_DN4311_c0_g3 | TRINITY_DN4311_c0_g3_i2.p1 | 1 | 1 | 5.8 | 206 | 0.00214348 | |
| TRINITY_DN43168_c0_g1 | TRINITY_DN43168_c0_g1_i1.p1 | 1 | 1 | 8 | 175 | 0.0000713063 | |
| TRINITY_DN43360_c0_g1 | TRINITY_DN43360_c0_g1_i1.p1 | 1 | 1 | 4.9 | 206 | 0.00145061 | |
| TRINITY_DN43631_c0_g1 | TRINITY_DN43631_c0_g1_i2.p1 | 1 | 1 | 0.9 | 1041 | 0.00724817 | |
| TRINITY_DN4365_c0_g2 | TRINITY_DN4365_c0_g2_i1.p1 | 1 | 1 | 0.8 | 906 | 0.0047857 | |
| TRINITY_DN43936_c0_g1 | TRINITY_DN43936_c0_g1_i1.p1 | 1 | 1 | 5 | 219 | 0.00030849 | |
| TRINITY_DN44133_c0_g1 | TRINITY_DN44133_c0_g1_i1.p1 | 1 | 1 | 8.1 | 135 | 0.00388299 | |
| TRINITY_DN44245_c0_g1 | TRINITY_DN44245_c0_g1_i1.p1 | 1 | 1 | 11.9 | 118 | 0.000202375 | |
| TRINITY_DN44386_c0_g1 | TRINITY_DN44386_c0_g1_i1.p1 | 1 | 1 | 4.2 | 212 | 0.00853096 | |
| TRINITY_DN44399_c0_g1 | TRINITY_DN44399_c0_g1_i1.p1 | 1 | 1 | 4.5 | 337 | 0.0000713063 | |
| TRINITY_DN44512_c0_g1 | TRINITY_DN44512_c0_g1_i1.p1 | 1 | 1 | 2.3 | 562 | 0.00438484 | |
| TRINITY_DN44665_c0_g1 | TRINITY_DN44665_c0_g1_i1.p1 | 1 | 1 | 4.6 | 197 | 0.0011767 | |
| TRINITY_DN4469_c0_g1 | TRINITY_DN4469_c0_g1_i5.p1 | 1 | 1 | 8.8 | 113 | 0.000646064 | |
| TRINITY_DN44910_c0_g1 | TRINITY_DN44910_c0_g1_i1.p1 | 1 | 1 | 6.8 | 206 | 0.0000713063 | |
| TRINITY_DN450_c0_g4 | TRINITY_DN450_c0_g4_i1.p1 | 1 | 1 | 1.3 | 602 | 0.0017239 | |
| TRINITY_DN45023_c0_g1 | TRINITY_DN45023_c0_g1_i1.p1 | 1 | 1 | 6.7 | 164 | 0.0000713063 | |
| TRINITY_DN45070_c0_g1 | TRINITY_DN45070_c0_g1_i1.p1 | 1 | 1 | 2 | 706 | 0.000202375 | |
| TRINITY_DN45267_c0_g1 | TRINITY_DN45267_c0_g1_i1.p1 | 1 | 1 | 2.6 | 229 | 0.00105996 | |
| TRINITY_DN45486_c0_g1 | TRINITY_DN45486_c0_g1_i1.p1 | 1 | 1 | 7.3 | 110 | 0.000596432 | |
| TRINITY_DN4568_c0_g3 | TRINITY_DN4568_c0_g3_i1.p1 | 1 | 1 | 8.3 | 120 | 0.000359389 | |
| TRINITY_DN4583_c0_g2 | TRINITY_DN4583_c0_g2_i1.p1 | 1 | 1 | 1.6 | 670 | 0.000506443 | |
| TRINITY_DN45897_c0_g1 | TRINITY_DN45897_c0_g1_i1.p1 | 1 | 1 | 2.1 | 382 | 0.0011767 | |
| TRINITY_DN459_c3_g1 | TRINITY_DN459_c3_g1_i1.p1 | 1 | 1 | 5.3 | 320 | 0.000819169 | |
| TRINITY_DN462_c0_g1 | TRINITY_DN462_c0_g1_i12.p1 | 1 | 1 | 1.1 | 705 | 0.00598978 | |
| TRINITY_DN4623_c0_g2 | TRINITY_DN4623_c0_g2_i1.p1 | 1 | 1 | 0.9 | 1392 | 0.0000713063 |
