Peptides and proteins identified by re-processing the raw mass-spectrometry data of every proteomic dataset with a single documented pipeline (Comet 2026.01 against the CnidoSite reference proteome plus cRAP contaminants, with Percolator target-decoy FDR control). Search parameters are dataset-specific and are shown in full for each dataset; peptides were mapped onto CnidoSite gene models, so every row links to its gene page.
| Gene | Protein | PSMs | Unique peptides | Coverage (%) | Length | Best q-value | Description |
|---|---|---|---|---|---|---|---|
| TRINITY_DN49306_c0_g1 | TRINITY_DN49306_c0_g1_i1.p1 | 1 | 1 | 3.2 | 282 | 0.00280799 | |
| TRINITY_DN49336_c0_g1 | TRINITY_DN49336_c0_g1_i1.p1 | 1 | 1 | 7 | 115 | 0.00101302 | |
| TRINITY_DN4944_c0_g6 | TRINITY_DN4944_c0_g6_i1.p1 | 1 | 1 | 16.5 | 164 | 0.000262312 | |
| TRINITY_DN49448_c0_g1 | TRINITY_DN49448_c0_g1_i1.p1 | 1 | 1 | 8.4 | 119 | 0.0023055 | |
| TRINITY_DN49451_c0_g1 | TRINITY_DN49451_c0_g1_i1.p1 | 1 | 1 | 1.5 | 677 | 0.00506415 | |
| TRINITY_DN49735_c0_g1 | TRINITY_DN49735_c0_g1_i1.p1 | 1 | 1 | 1.2 | 595 | 0.00351761 | |
| TRINITY_DN49925_c0_g1 | TRINITY_DN49925_c0_g1_i1.p1 | 1 | 1 | 6.5 | 153 | 0.0000713063 | |
| TRINITY_DN4999_c0_g1 | TRINITY_DN4999_c0_g1_i1.p1 | 1 | 1 | 7.9 | 140 | 0.00339958 | |
| TRINITY_DN500_c0_g1 | TRINITY_DN500_c0_g1_i3.p1 | 1 | 1 | 1.7 | 665 | 0.000202375 | |
| TRINITY_DN50083_c0_g1 | TRINITY_DN50083_c0_g1_i1.p1 | 1 | 1 | 11 | 173 | 0.0000713063 | |
| TRINITY_DN50181_c0_g1 | TRINITY_DN50181_c0_g1_i1.p1 | 1 | 1 | 8.6 | 186 | 0.000413126 | |
| TRINITY_DN50223_c0_g1 | TRINITY_DN50223_c0_g1_i1.p1 | 1 | 1 | 4.7 | 258 | 0.00201696 | |
| TRINITY_DN50310_c0_g1 | TRINITY_DN50310_c0_g1_i1.p1 | 1 | 1 | 7.3 | 164 | 0.000556886 | |
| TRINITY_DN50320_c0_g1 | TRINITY_DN50320_c0_g1_i1.p1 | 1 | 1 | 6.9 | 116 | 0.00214348 | |
| TRINITY_DN50506_c0_g1 | TRINITY_DN50506_c0_g1_i1.p1 | 1 | 1 | 1.5 | 404 | 0.00438484 | |
| TRINITY_DN5054_c0_g1 | TRINITY_DN5054_c0_g1_i1.p1 | 1 | 1 | 6.5 | 168 | 0.0000713063 | |
| TRINITY_DN50650_c0_g1 | TRINITY_DN50650_c0_g1_i1.p1 | 1 | 1 | 5.6 | 195 | 0.00030849 | |
| TRINITY_DN50688_c0_g1 | TRINITY_DN50688_c0_g1_i1.p1 | 1 | 1 | 12.7 | 110 | 0.00590873 | |
| TRINITY_DN50722_c0_g1 | TRINITY_DN50722_c0_g1_i1.p1 | 1 | 1 | 8.7 | 173 | 0.00884667 | |
| TRINITY_DN50770_c0_g1 | TRINITY_DN50770_c0_g1_i1.p1 | 1 | 1 | 6.2 | 162 | 0.00683173 | |
| TRINITY_DN50812_c0_g1 | TRINITY_DN50812_c0_g1_i1.p1 | 1 | 1 | 8.1 | 135 | 0.000596432 | |
| TRINITY_DN5136_c0_g1 | TRINITY_DN5136_c0_g1_i1.p1 | 1 | 1 | 16.4 | 110 | 0.0000713063 | |
| TRINITY_DN515_c0_g1 | TRINITY_DN515_c0_g1_i2.p1 | 1 | 1 | 2.9 | 490 | 0.0000713063 | |
| TRINITY_DN5166_c0_g2 | TRINITY_DN5166_c0_g2_i1.p1 | 1 | 1 | 8.2 | 147 | 0.0000713063 | |
| TRINITY_DN51691_c0_g1 | TRINITY_DN51691_c0_g1_i1.p1 | 1 | 1 | 1.4 | 715 | 0.00506415 |
