Peptides and proteins identified by re-processing the raw mass-spectrometry data of every proteomic dataset with a single documented pipeline (Comet 2026.01 against the CnidoSite reference proteome plus cRAP contaminants, with Percolator target-decoy FDR control). Search parameters are dataset-specific and are shown in full for each dataset; peptides were mapped onto CnidoSite gene models, so every row links to its gene page.
| Gene | Protein | PSMs | Unique peptides | Coverage (%) | Length | Best q-value | Description |
|---|---|---|---|---|---|---|---|
| TRINITY_DN5570_c1_g1 | TRINITY_DN5570_c1_g1_i1.p1 | 1 | 1 | 4.6 | 262 | 0.00454295 | |
| TRINITY_DN55746_c0_g1 | TRINITY_DN55746_c0_g1_i1.p1 | 1 | 1 | 10.2 | 147 | 0.000262312 | |
| TRINITY_DN55793_c0_g1 | TRINITY_DN55793_c0_g1_i1.p1 | 1 | 1 | 8.1 | 111 | 0.000359389 | |
| TRINITY_DN5580_c0_g1 | TRINITY_DN5580_c0_g1_i4.p1 | 1 | 1 | 9.4 | 117 | 0.00724817 | |
| TRINITY_DN559_c0_g1 | TRINITY_DN559_c0_g1_i1.p1 | 1 | 1 | 7.5 | 174 | 0.00164551 | |
| TRINITY_DN55990_c0_g1 | TRINITY_DN55990_c0_g1_i1.p1 | 1 | 1 | 4.4 | 275 | 0.0000713063 | |
| TRINITY_DN56258_c0_g1 | TRINITY_DN56258_c0_g1_i1.p1 | 1 | 1 | 5.1 | 254 | 0.00339958 | |
| TRINITY_DN56259_c0_g1 | TRINITY_DN56259_c0_g1_i1.p1 | 1 | 1 | 6 | 184 | 0.00964813 | |
| TRINITY_DN56272_c0_g1 | TRINITY_DN56272_c0_g1_i1.p1 | 1 | 1 | 6.1 | 261 | 0.00300606 | |
| TRINITY_DN56551_c0_g1 | TRINITY_DN56551_c0_g1_i1.p1 | 1 | 1 | 1.4 | 842 | 0.0000713063 | |
| TRINITY_DN566_c0_g1 | TRINITY_DN566_c0_g1_i12.p1 | 1 | 1 | 1 | 919 | 0.00068102 | |
| TRINITY_DN56635_c0_g1 | TRINITY_DN56635_c0_g1_i1.p1 | 1 | 1 | 8.6 | 151 | 0.00126941 | |
| TRINITY_DN56814_c0_g1 | TRINITY_DN56814_c0_g1_i1.p1 | 1 | 1 | 7.1 | 226 | 0.0000713063 | |
| TRINITY_DN5684_c2_g1 | TRINITY_DN5684_c2_g1_i1.p1 | 1 | 1 | 2.5 | 878 | 0.0000713063 | |
| TRINITY_DN5685_c0_g1 | TRINITY_DN5685_c0_g1_i1.p1 | 1 | 1 | 4.4 | 204 | 0.003324 | |
| TRINITY_DN5690_c0_g1 | TRINITY_DN5690_c0_g1_i1.p1 | 1 | 1 | 0.6 | 1616 | 0.000967266 | |
| TRINITY_DN56916_c0_g1 | TRINITY_DN56916_c0_g1_i1.p1 | 1 | 1 | 6.8 | 147 | 0.0000713063 | |
| TRINITY_DN56983_c0_g1 | TRINITY_DN56983_c0_g1_i1.p1 | 1 | 1 | 1.5 | 476 | 0.00546862 | |
| TRINITY_DN56994_c0_g1 | TRINITY_DN56994_c0_g1_i1.p1 | 1 | 1 | 5.7 | 106 | 0.00470498 | |
| TRINITY_DN57035_c0_g1 | TRINITY_DN57035_c0_g1_i1.p1 | 1 | 1 | 9.9 | 182 | 0.0000713063 | |
| TRINITY_DN57099_c0_g1 | TRINITY_DN57099_c0_g1_i1.p1 | 1 | 1 | 11.7 | 120 | 0.0000713063 | |
| TRINITY_DN5716_c0_g1 | TRINITY_DN5716_c0_g1_i1.p1 | 1 | 1 | 7.9 | 101 | 0.00506415 | |
| TRINITY_DN57270_c0_g1 | TRINITY_DN57270_c0_g1_i1.p1 | 1 | 1 | 1.1 | 1059 | 0.00267989 | |
| TRINITY_DN5739_c0_g1 | TRINITY_DN5739_c0_g1_i5.p1 | 1 | 1 | 11 | 109 | 0.00030849 | |
| TRINITY_DN5754_c0_g4 | TRINITY_DN5754_c0_g4_i1.p1 | 1 | 1 | 1.4 | 621 | 0.00347887 |
