Peptides and proteins identified by re-processing the raw mass-spectrometry data of every proteomic dataset with a single documented pipeline (Comet 2026.01 against the CnidoSite reference proteome plus cRAP contaminants, with Percolator target-decoy FDR control). Search parameters are dataset-specific and are shown in full for each dataset; peptides were mapped onto CnidoSite gene models, so every row links to its gene page.
| Gene | Protein | PSMs | Unique peptides | Coverage (%) | Length | Best q-value | Description |
|---|---|---|---|---|---|---|---|
| TRINITY_DN698_c0_g1 | TRINITY_DN698_c0_g1_i1.p1 | 1 | 1 | 5 | 242 | 0.00811309 | |
| TRINITY_DN6990_c0_g1 | TRINITY_DN6990_c0_g1_i1.p1 | 1 | 1 | 2.1 | 526 | 0.00672478 | |
| TRINITY_DN70_c7_g2 | TRINITY_DN70_c7_g2_i1.p1 | 1 | 1 | 1.2 | 1468 | 0.0000713063 | |
| TRINITY_DN701_c0_g1 | TRINITY_DN701_c0_g1_i1.p1 | 1 | 1 | 1 | 1039 | 0.000262312 | |
| TRINITY_DN701_c6_g1 | TRINITY_DN701_c6_g1_i1.p1 | 1 | 1 | 3.9 | 203 | 0.00131081 | |
| TRINITY_DN7020_c0_g2 | TRINITY_DN7020_c0_g2_i1.p1 | 1 | 1 | 0.9 | 997 | 0.00563167 | |
| TRINITY_DN7040_c1_g2 | TRINITY_DN7040_c1_g2_i1.p1 | 1 | 1 | 2.5 | 550 | 0.0000713063 | |
| TRINITY_DN708_c1_g1 | TRINITY_DN708_c1_g1_i3.p1 | 1 | 1 | 0.6 | 1801 | 0.000646064 | |
| TRINITY_DN711_c0_g1 | TRINITY_DN711_c0_g1_i1.p1 | 1 | 1 | 5.3 | 283 | 0.0000713063 | |
| TRINITY_DN7120_c0_g1 | TRINITY_DN7120_c0_g1_i1.p1 | 1 | 1 | 1.4 | 875 | 0.000819169 | |
| TRINITY_DN72_c17_g1 | TRINITY_DN72_c17_g1_i1.p1 | 1 | 1 | 1.6 | 817 | 0.000646064 | |
| TRINITY_DN7279_c0_g1 | TRINITY_DN7279_c0_g1_i1.p1 | 1 | 1 | 3 | 403 | 0.000556886 | |
| TRINITY_DN729_c1_g2 | TRINITY_DN729_c1_g2_i1.p1 | 1 | 1 | 5.7 | 175 | 0.00168555 | |
| TRINITY_DN7302_c1_g1 | TRINITY_DN7302_c1_g1_i2.p1 | 1 | 1 | 0.9 | 770 | 0.00876799 | |
| TRINITY_DN7321_c0_g2 | TRINITY_DN7321_c0_g2_i1.p1 | 1 | 1 | 3.2 | 505 | 0.0000713063 | |
| TRINITY_DN7324_c0_g1 | TRINITY_DN7324_c0_g1_i1.p2 | 1 | 1 | 1.5 | 686 | 0.0000713063 | |
| TRINITY_DN7328_c0_g1 | TRINITY_DN7328_c0_g1_i4.p1 | 1 | 1 | 5.3 | 302 | 0.0000713063 | |
| TRINITY_DN7341_c1_g3 | TRINITY_DN7341_c1_g3_i2.p1 | 1 | 1 | 2.8 | 425 | 0.000646064 | |
| TRINITY_DN7357_c0_g1 | TRINITY_DN7357_c0_g1_i2.p1 | 1 | 1 | 3 | 264 | 0.00147178 | |
| TRINITY_DN7384_c0_g1 | TRINITY_DN7384_c0_g1_i1.p1 | 1 | 1 | 5.5 | 165 | 0.000596432 | |
| TRINITY_DN75_c0_g1 | TRINITY_DN75_c0_g1_i12.p1 | 1 | 1 | 6.2 | 146 | 0.0000713063 | |
| TRINITY_DN753_c0_g2 | TRINITY_DN753_c0_g2_i1.p1 | 1 | 1 | 3.1 | 287 | 0.000359389 | |
| TRINITY_DN7553_c7_g1 | TRINITY_DN7553_c7_g1_i1.p1 | 1 | 1 | 2.1 | 518 | 0.00176802 | |
| TRINITY_DN7564_c0_g1 | TRINITY_DN7564_c0_g1_i4.p1 | 1 | 1 | 5.4 | 223 | 0.0052656 | |
| TRINITY_DN7589_c0_g1 | TRINITY_DN7589_c0_g1_i3.p1 | 1 | 1 | 5 | 220 | 0.0000713063 |
