Peptides and proteins identified by re-processing the raw mass-spectrometry data of every proteomic dataset with a single documented pipeline (Comet 2026.01 against the CnidoSite reference proteome plus cRAP contaminants, with Percolator target-decoy FDR control). Search parameters are dataset-specific and are shown in full for each dataset; peptides were mapped onto CnidoSite gene models, so every row links to its gene page.
| Gene | Protein | PSMs | Unique peptides | Coverage (%) | Length | Best q-value | Description |
|---|---|---|---|---|---|---|---|
| TRINITY_DN8953_c0_g1 | TRINITY_DN8953_c0_g1_i2.p1 | 1 | 1 | 2.2 | 858 | 0.0000713063 | |
| TRINITY_DN90_c0_g1 | TRINITY_DN90_c0_g1_i2.p1 | 1 | 1 | 0.7 | 1989 | 0.000262312 | |
| TRINITY_DN91_c0_g1 | TRINITY_DN91_c0_g1_i11.p1 | 1 | 1 | 7.6 | 185 | 0.0000713063 | |
| TRINITY_DN911_c1_g4 | TRINITY_DN911_c1_g4_i1.p1 | 1 | 1 | 7.3 | 178 | 0.00176802 | |
| TRINITY_DN9164_c3_g1 | TRINITY_DN9164_c3_g1_i1.p1 | 1 | 1 | 7.4 | 175 | 0.00147178 | |
| TRINITY_DN9182_c0_g1 | TRINITY_DN9182_c0_g1_i2.p1 | 1 | 1 | 1.1 | 1210 | 0.000202375 | |
| TRINITY_DN9228_c0_g1 | TRINITY_DN9228_c0_g1_i8.p1 | 1 | 1 | 8 | 410 | 0.00101302 | |
| TRINITY_DN9328_c0_g1 | TRINITY_DN9328_c0_g1_i3.p1 | 1 | 1 | 2 | 564 | 0.00168555 | |
| TRINITY_DN9513_c0_g1 | TRINITY_DN9513_c0_g1_i1.p1 | 1 | 1 | 4 | 350 | 0.0000713063 | |
| TRINITY_DN9540_c0_g1 | TRINITY_DN9540_c0_g1_i1.p1 | 1 | 1 | 2.6 | 302 | 0.00694473 | |
| TRINITY_DN960_c0_g3 | TRINITY_DN960_c0_g3_i2.p1 | 1 | 1 | 5.6 | 216 | 0.000506443 | |
| TRINITY_DN960_c0_g6 | TRINITY_DN960_c0_g6_i1.p1 | 1 | 1 | 5.5 | 470 | 0.0000713063 | |
| TRINITY_DN9638_c0_g1 | TRINITY_DN9638_c0_g1_i1.p1 | 1 | 1 | 2.9 | 444 | 0.000202375 | |
| TRINITY_DN964_c0_g1 | TRINITY_DN964_c0_g1_i6.p1 | 1 | 1 | 4.2 | 192 | 0.00194022 | |
| TRINITY_DN9660_c0_g1 | TRINITY_DN9660_c0_g1_i1.p1 | 1 | 1 | 11.3 | 266 | 0.00426858 | |
| TRINITY_DN9667_c0_g1 | TRINITY_DN9667_c0_g1_i1.p1 | 1 | 1 | 1.5 | 844 | 0.000202375 | |
| TRINITY_DN9748_c0_g1 | TRINITY_DN9748_c0_g1_i2.p1 | 1 | 1 | 3.6 | 281 | 0.00311882 | |
| TRINITY_DN9882_c0_g1 | TRINITY_DN9882_c0_g1_i6.p1 | 1 | 1 | 4.1 | 219 | 0.000596432 | |
| TRINITY_DN9884_c0_g1 | TRINITY_DN9884_c0_g1_i1.p2 | 1 | 1 | 3.9 | 311 | 0.00155521 | |
| TRINITY_DN990_c0_g4 | TRINITY_DN990_c0_g4_i1.p1 | 1 | 1 | 4.2 | 356 | 0.0000713063 | |
| TRINITY_DN9974_c0_g1 | TRINITY_DN9974_c0_g1_i2.p1 | 1 | 1 | 9.9 | 111 | 0.0000713063 | |
| TRINITY_DN998_c7_g1 | TRINITY_DN998_c7_g1_i10.p1 | 1 | 1 | 4.2 | 236 | 0.0000713063 |
