Peptides and proteins identified by re-processing the raw mass-spectrometry data of
every proteomic dataset with a single documented pipeline
(Comet 2026.01 against the CnidoSite reference proteome plus cRAP contaminants,
with Percolator target-decoy FDR control). Search parameters are
dataset-specific and are shown in full for each dataset; peptides were mapped onto
CnidoSite gene models, so every row links to its gene page.
Dataset provenance & search parameters — PXD060643
SpeciesActinia fragacea
Tissuenematocysts, various tissues
PRIDE accessionPXD060643
Statusreprocessed
Search engineComet 2026.01
Reference proteome/mnt/sdb/jackie/cnidaria_omics/transcriptome_proteins/Actinia_tenebrosa.rep.pep
Enzymetrypsin
Missed cleavages2
Precursor tolerance10 ppm
Fragment tolerance0.02 Da
Fixed modificationC+57.021464
Variable modificationM+15.9949
Decoy strategyComet internal reversed (1:1)
FDR (PSM)0.01
Quantificationspectral counting (PSMs)
Proteins4572
Peptides (q≤0.01)24717
PSMs (q≤0.01)130483
reprocessed against the CnidoSite reference proteome
| Gene |
Protein |
PSMs |
Unique peptides |
Coverage (%) |
Length |
Best q-value |
Description |
|
No proteins match the current selection.
|
