Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 4 gene–annotation pairs matching IPR001566 across 148 genomes · 44 ms.

Species with hits:Hydra oligactis 2Aurelia aurita complex sp. Pacific 1Hydra viridissima 1
SpeciesGene IDInterPro termMatchSourceBrowser
Aurelia aurita complex sp. Pacificscaffold10.g189.t1IPR00156623S rRNA (uracil(1939)-C(5))-methyltransferase RlmDInterproscanJBrowse
Hydra oligactisHOLI00001.G51578IPR00156623S rRNA (uracil(1939)-C(5))-methyltransferase RlmDInterproscanJBrowse
Hydra oligactisHOLI00150.G2250IPR00156623S rRNA (uracil(1939)-C(5))-methyltransferase RlmDInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000023313.1IPR00156623S rRNA (uracil(1939)-C(5))-methyltransferase RlmDInterproscanJBrowse

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