Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 12 gene–annotation pairs matching IPR003647 across 148 genomes · 24 ms.

Species with hits:Paragorgia papillata 4Podabacia crustacea 2Stylophora pistillata 2Montipora grisea 1Porites cylindrica 1Porites lobata 1Porites rus 1
SpeciesGene IDInterPro termMatchSourceBrowser
Montipora griseaANN11319-RAIPR003647Intron encoded nuclease repeatInterproscanJBrowse
Podabacia crustaceaPcrG012589.mRNA1IPR003647Intron encoded nuclease repeatInterproscanJBrowse
Podabacia crustaceaPcrG020078.mRNA1IPR003647Intron encoded nuclease repeatInterproscanJBrowse
Porites cylindricaENSZOFP00000027205.1IPR003647Intron encoded nuclease repeatInterproscanJBrowse
Porites lobataENSNQRP00000037226.1IPR003647Intron encoded nuclease repeatInterproscanJBrowse
Paragorgia papillataPpa0G120910IPR003647Intron encoded nuclease repeatInterproscanJBrowse
Paragorgia papillataPpa0G120910IPR003647Intron encoded nuclease repeatInterproscanJBrowse
Paragorgia papillataPpa0G232370IPR003647Intron encoded nuclease repeatInterproscanJBrowse
Paragorgia papillataPpa0G232370IPR003647Intron encoded nuclease repeatInterproscanJBrowse
Porites rusENSGYQP00005013597.1IPR003647Intron encoded nuclease repeatInterproscanJBrowse
Stylophora pistillataPFX33263.1IPR003647Intron encoded nuclease repeatInterproscanJBrowse
Stylophora pistillataPFX33263.1IPR003647Intron encoded nuclease repeatInterproscanJBrowse

TOP