Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 4 gene–annotation pairs matching IPR016909 across 148 genomes · 26 ms.

Species with hits:Hydra oligactis 3Aurelia aurita complex sp. Pacific 1
SpeciesGene IDInterPro termMatchSourceBrowser
Aurelia aurita complex sp. Pacificscaffold2936.g2.t1IPR016909Ribosomal RNA large subunit methyltransferase FInterproscanJBrowse
Hydra oligactisHOLI00001.G53828IPR016909Ribosomal RNA large subunit methyltransferase FInterproscanJBrowse
Hydra oligactisHOLI00001.G53828IPR016909Ribosomal RNA large subunit methyltransferase FInterproscanJBrowse
Hydra oligactisHOLI00299.G47010IPR016909Ribosomal RNA large subunit methyltransferase FInterproscanJBrowse

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