Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 3 gene–annotation pairs matching IPR018145 across 1 genomes (restricted to Cassiopea xamachana) · 1 ms.

Species with hits:← all speciesCassiopea xamachana 3
SpeciesGene IDInterPro termMatchSourceBrowser
Cassiopea xamachanaCxam_g3972.t1IPR018145CagE, TrbE, VirB component of type IV transporter system, central domainInterproscanJBrowse
Cassiopea xamachanaCxam_g10577.t1IPR018145CagE, TrbE, VirB component of type IV transporter system, central domainInterproscanJBrowse
Cassiopea xamachanaCxam_g16139.t1IPR018145CagE, TrbE, VirB component of type IV transporter system, central domainInterproscanJBrowse

TOP