Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 9 gene–annotation pairs matching IPR018145 across 148 genomes · 43 ms.

Species with hits:Cassiopea xamachana 3Hydractinia symbiolongicarpus 3Hydra oligactis 2Hydra viridissima 1
SpeciesGene IDInterPro termMatchSourceBrowser
Cassiopea xamachanaCxam_g3972.t1IPR018145CagE, TrbE, VirB component of type IV transporter system, central domainInterproscanJBrowse
Cassiopea xamachanaCxam_g10577.t1IPR018145CagE, TrbE, VirB component of type IV transporter system, central domainInterproscanJBrowse
Cassiopea xamachanaCxam_g16139.t1IPR018145CagE, TrbE, VirB component of type IV transporter system, central domainInterproscanJBrowse
Hydra oligactisHOLI03798.G33166IPR018145CagE, TrbE, VirB component of type IV transporter system, central domainInterproscanJBrowse
Hydra oligactisHOLI00264.G3211IPR018145CagE, TrbE, VirB component of type IV transporter system, central domainInterproscanJBrowse
Hydractinia symbiolongicarpusHSymV2.0_g02.02602_t1IPR018145CagE, TrbE, VirB component of type IV transporter system, central domainInterproscanJBrowse
Hydractinia symbiolongicarpusHSymV2.0_g02.02296_t1IPR018145CagE, TrbE, VirB component of type IV transporter system, central domainInterproscanJBrowse
Hydractinia symbiolongicarpusHSymV2.0_g02.02125_t1IPR018145CagE, TrbE, VirB component of type IV transporter system, central domainInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000022776.1IPR018145CagE, TrbE, VirB component of type IV transporter system, central domainInterproscanJBrowse

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