Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 17 gene–annotation pairs matching IPR034419 across 148 genomes · 18 ms.

Species with hits:Actinia mediterranea 2Anthopleura xanthogrammica 2Duncanopsammia axifuga 2Diadumene lineata 2Nematostella vectensis 2Alvinactis idsseensis sp. Nov. 1Actinoscyphia liui 1Actinia tenebrosa 1Cladopsammia gracilis 1Palythoa mizigama 1Palythoa umbrosa 1Telmatactis stephensoni 1
SpeciesGene IDInterPro termMatchSourceBrowser
Alvinactis idsseensis sp. Nov.alvinactis_v1_g6785IPR034419Probable RNA-binding protein 19, RNA recognition motif 3InterproscanJBrowse
Actinoscyphia liuigene06398.t1IPR034419Probable RNA-binding protein 19, RNA recognition motif 3InterproscanJBrowse
Actinia mediterraneaENSQPTP00000069615.1IPR034419Probable RNA-binding protein 19, RNA recognition motif 3InterproscanJBrowse
Actinia mediterraneaENSQPTP00000031293.1IPR034419Probable RNA-binding protein 19, RNA recognition motif 3InterproscanJBrowse
Actinia tenebrosaXP_031573277.1IPR034419Probable RNA-binding protein 19, RNA recognition motif 3InterproscanJBrowse
Anthopleura xanthogrammicaENSOJPP00000038196.1IPR034419Probable RNA-binding protein 19, RNA recognition motif 3InterproscanJBrowse
Anthopleura xanthogrammicaENSOJPP00000038204.1IPR034419Probable RNA-binding protein 19, RNA recognition motif 3InterproscanJBrowse
Cladopsammia gracilisBRAKERTYJP00000013943.1IPR034419Probable RNA-binding protein 19, RNA recognition motif 3InterproscanJBrowse
Duncanopsammia axifugaENSXFYP00000049811.1IPR034419Probable RNA-binding protein 19, RNA recognition motif 3InterproscanJBrowse
Duncanopsammia axifugaENSXFYP00000049823.1IPR034419Probable RNA-binding protein 19, RNA recognition motif 3InterproscanJBrowse
Diadumene lineataENSDLIP00000016710.1IPR034419Probable RNA-binding protein 19, RNA recognition motif 3InterproscanJBrowse
Diadumene lineataENSDLIP00000016728.1IPR034419Probable RNA-binding protein 19, RNA recognition motif 3InterproscanJBrowse
Nematostella vectensisXP_032220436.2IPR034419Probable RNA-binding protein 19, RNA recognition motif 3InterproscanJBrowse
Nematostella vectensisXP_032220437.2IPR034419Probable RNA-binding protein 19, RNA recognition motif 3InterproscanJBrowse
Palythoa mizigamac0327.g015.t1.p1IPR034419Probable RNA-binding protein 19, RNA recognition motif 3InterproscanJBrowse
Palythoa umbrosac0380.g002.t1IPR034419Probable RNA-binding protein 19, RNA recognition motif 3InterproscanJBrowse
Telmatactis stephensoniBRAKERFUXP00000047409.1IPR034419Probable RNA-binding protein 19, RNA recognition motif 3InterproscanJBrowse

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