Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 15 gene–annotation pairs matching IPR042107 across 148 genomes · 10 ms.

Species with hits:Hydra oligactis 4Calvadosia cruxmelitensis 2Turritopsis rubra 2Aurelia aurita complex sp. Pacific 1Actinernus sp. WN-2022 1Chrysogorgia sp. JL179-B06 1Hydractinia echinata 1Hemicorallium imperiale 1Hydra viridissima 1Montipora grisea 1
SpeciesGene IDInterPro termMatchSourceBrowser
Aurelia aurita complex sp. Pacificscaffold2493.g4.t1IPR042107DNA-directed RNA polymerase, beta subunit, external 1 domain superfamilyInterproscanJBrowse
Actinernus sp. WN-2022Acti_006453-T1IPR042107DNA-directed RNA polymerase, beta subunit, external 1 domain superfamilyInterproscanJBrowse
Calvadosia cruxmelitensisg876.t1IPR042107DNA-directed RNA polymerase, beta subunit, external 1 domain superfamilyInterproscanJBrowse
Calvadosia cruxmelitensisg1098.t1IPR042107DNA-directed RNA polymerase, beta subunit, external 1 domain superfamilyInterproscanJBrowse
Chrysogorgia sp. JL179-B06Csp0G128910IPR042107DNA-directed RNA polymerase, beta subunit, external 1 domain superfamilyInterproscanJBrowse
Hydractinia echinataENSDJXP00000043901.1IPR042107DNA-directed RNA polymerase, beta subunit, external 1 domain superfamilyInterproscanJBrowse
Hemicorallium imperialeevm.model.Contig123.284IPR042107DNA-directed RNA polymerase, beta subunit, external 1 domain superfamilyInterproscanJBrowse
Hydra oligactisHOLI00823.G36002IPR042107DNA-directed RNA polymerase, beta subunit, external 1 domain superfamilyInterproscanJBrowse
Hydra oligactisHOLI00014.G9369IPR042107DNA-directed RNA polymerase, beta subunit, external 1 domain superfamilyInterproscanJBrowse
Hydra oligactisHOLI00001.G52346IPR042107DNA-directed RNA polymerase, beta subunit, external 1 domain superfamilyInterproscanJBrowse
Hydra oligactisHOLI00002.G21995IPR042107DNA-directed RNA polymerase, beta subunit, external 1 domain superfamilyInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000022662.1IPR042107DNA-directed RNA polymerase, beta subunit, external 1 domain superfamilyInterproscanJBrowse
Montipora griseaANN34490-RAIPR042107DNA-directed RNA polymerase, beta subunit, external 1 domain superfamilyInterproscanJBrowse
Turritopsis rubraBRAKERIOWP00000001494.1IPR042107DNA-directed RNA polymerase, beta subunit, external 1 domain superfamilyInterproscanJBrowse
Turritopsis rubraBRAKERIOWP00000005626.1IPR042107DNA-directed RNA polymerase, beta subunit, external 1 domain superfamilyInterproscanJBrowse

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