Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 14 gene–annotation pairs matching IPR048635 across 148 genomes · 35 ms.

Species with hits:Montipora grisea 10Hydra oligactis 2Calvadosia cruxmelitensis 1Hydra viridissima 1
SpeciesGene IDInterPro termMatchSourceBrowser
Calvadosia cruxmelitensisg654.t1IPR048635Transcription-repair-coupling factor, D3 domainInterproscanJBrowse
Hydra oligactisHOLI00150.G2405IPR048635Transcription-repair-coupling factor, D3 domainInterproscanJBrowse
Hydra oligactisHOLI00001.G51186IPR048635Transcription-repair-coupling factor, D3 domainInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000023193.1IPR048635Transcription-repair-coupling factor, D3 domainInterproscanJBrowse
Montipora griseaANN20809-RAIPR048635Transcription-repair-coupling factor, D3 domainInterproscanJBrowse
Montipora griseaANN25832-RAIPR048635Transcription-repair-coupling factor, D3 domainInterproscanJBrowse
Montipora griseaANN32892-RAIPR048635Transcription-repair-coupling factor, D3 domainInterproscanJBrowse
Montipora griseaANN30127-RAIPR048635Transcription-repair-coupling factor, D3 domainInterproscanJBrowse
Montipora griseaANN35019-RAIPR048635Transcription-repair-coupling factor, D3 domainInterproscanJBrowse
Montipora griseaANN39767-RAIPR048635Transcription-repair-coupling factor, D3 domainInterproscanJBrowse
Montipora griseaANN22403-RAIPR048635Transcription-repair-coupling factor, D3 domainInterproscanJBrowse
Montipora griseaANN34692-RAIPR048635Transcription-repair-coupling factor, D3 domainInterproscanJBrowse
Montipora griseaANN36607-RAIPR048635Transcription-repair-coupling factor, D3 domainInterproscanJBrowse
Montipora griseaANN34403-RAIPR048635Transcription-repair-coupling factor, D3 domainInterproscanJBrowse

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