Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 6 gene–annotation pairs matching IPR052003 across 148 genomes · 43 ms.

Species with hits:Hydra vulgaris 2Nematostella vectensis 2Hemicorallium imperiale 1Hydra viridissima 1
SpeciesGene IDInterPro termMatchSourceBrowser
Hemicorallium imperialeevm.model.Chr17.698IPR052003Homologous Recombination DNA-Binding ProteinInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000000093.1IPR052003Homologous Recombination DNA-Binding ProteinInterproscanJBrowse
Hydra vulgarisXP_065668705.1IPR052003Homologous Recombination DNA-Binding ProteinInterproscanJBrowse
Hydra vulgarisXP_065668704.1IPR052003Homologous Recombination DNA-Binding ProteinInterproscanJBrowse
Nematostella vectensisXP_001634790.2IPR052003Homologous Recombination DNA-Binding ProteinInterproscanJBrowse
Nematostella vectensisXP_032240064.2IPR052003Homologous Recombination DNA-Binding ProteinInterproscanJBrowse

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