Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 19 gene–annotation pairs matching PF02311 across 148 genomes · 51 ms.

Species with hits:Hydra oligactis 18Aurelia aurita complex sp. Pacific 1
SpeciesGene IDPfam termMatchSourceBrowser
Aurelia aurita complex sp. Pacificscaffold228.g16.t1PF02311AraC-like ligand binding domainInterproscanJBrowse
Hydra oligactisHOLI00504.G55366PF02311AraC-like ligand binding domainInterproscanJBrowse
Hydra oligactisHOLI00001.G49392PF02311AraC-like ligand binding domainInterproscanJBrowse
Hydra oligactisHOLI00001.G50724PF02311AraC-like ligand binding domainInterproscanJBrowse
Hydra oligactisHOLI00002.G21730PF02311AraC-like ligand binding domainInterproscanJBrowse
Hydra oligactisHOLI00823.G35975PF02311AraC-like ligand binding domainInterproscanJBrowse
Hydra oligactisHOLI00014.G9798PF02311AraC-like ligand binding domainInterproscanJBrowse
Hydra oligactisHOLI00001.G52413PF02311AraC-like ligand binding domainInterproscanJBrowse
Hydra oligactisHOLI00014.G9527PF02311AraC-like ligand binding domainInterproscanJBrowse
Hydra oligactisHOLI00001.G53441PF02311AraC-like ligand binding domainInterproscanJBrowse
Hydra oligactisHOLI00150.G2315PF02311AraC-like ligand binding domainInterproscanJBrowse
Hydra oligactisHOLI00001.G50811PF02311AraC-like ligand binding domainInterproscanJBrowse
Hydra oligactisHOLI00001.G50685PF02311AraC-like ligand binding domainInterproscanJBrowse
Hydra oligactisHOLI00014.G9702PF02311AraC-like ligand binding domainInterproscanJBrowse
Hydra oligactisHOLI00504.G55258PF02311AraC-like ligand binding domainInterproscanJBrowse
Hydra oligactisHOLI00001.G49917PF02311AraC-like ligand binding domainInterproscanJBrowse
Hydra oligactisHOLI00059.G25694PF02311AraC-like ligand binding domainInterproscanJBrowse
Hydra oligactisHOLI00643.G15981PF02311AraC-like ligand binding domainInterproscanJBrowse
Hydra oligactisHOLI00001.G50289PF02311AraC-like ligand binding domainInterproscanJBrowse

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