Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 5 gene–annotation pairs matching PF03872 across 148 genomes · 22 ms.

Species with hits:Hydra oligactis 3Aurelia aurita complex sp. Pacific 1Hydra viridissima 1
SpeciesGene IDPfam termMatchSourceBrowser
Aurelia aurita complex sp. Pacificscaffold10.g194.t1PF03872Anti sigma-E protein RseA, N-terminal domainInterproscanJBrowse
Hydra oligactisHOLI00001.G51697PF03872Anti sigma-E protein RseA, N-terminal domainInterproscanJBrowse
Hydra oligactisHOLI01423.G1576PF03872Anti sigma-E protein RseA, N-terminal domainInterproscanJBrowse
Hydra oligactisHOLI00059.G26254PF03872Anti sigma-E protein RseA, N-terminal domainInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000022748.1PF03872Anti sigma-E protein RseA, N-terminal domainInterproscanJBrowse

TOP