Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 17 gene–annotation pairs matching PF04545 across 1 genomes (restricted to Cassiopea xamachana) · 4 ms.

Species with hits:← all speciesCassiopea xamachana 17
SpeciesGene IDPfam termMatchSourceBrowser
Cassiopea xamachanaCxam_g19690.t1PF04545Sigma-70, region 4InterproscanJBrowse
Cassiopea xamachanaCxam_g11337.t1PF04545Sigma-70, region 4InterproscanJBrowse
Cassiopea xamachanaCxam_g14783.t1PF04545Sigma-70, region 4InterproscanJBrowse
Cassiopea xamachanaCxam_g10380.t1PF04545Sigma-70, region 4InterproscanJBrowse
Cassiopea xamachanaCxam_g4148.t1PF04545Sigma-70, region 4InterproscanJBrowse
Cassiopea xamachanaCxam_g10693.t1PF04545Sigma-70, region 4InterproscanJBrowse
Cassiopea xamachanaCxam_g7566.t1PF04545Sigma-70, region 4InterproscanJBrowse
Cassiopea xamachanaCxam_g17790.t1PF04545Sigma-70, region 4InterproscanJBrowse
Cassiopea xamachanaCxam_g879.t1PF04545Sigma-70, region 4InterproscanJBrowse
Cassiopea xamachanaCxam_g19232.t1PF04545Sigma-70, region 4InterproscanJBrowse
Cassiopea xamachanaCxam_g6519.t1PF04545Sigma-70, region 4InterproscanJBrowse
Cassiopea xamachanaCxam_g21211.t1PF04545Sigma-70, region 4InterproscanJBrowse
Cassiopea xamachanaCxam_g11248.t1PF04545Sigma-70, region 4InterproscanJBrowse
Cassiopea xamachanaCxam_g966.t1PF04545Sigma-70, region 4InterproscanJBrowse
Cassiopea xamachanaCxam_g10032.t1PF04545Sigma-70, region 4InterproscanJBrowse
Cassiopea xamachanaCxam_g3236.t1PF04545Sigma-70, region 4InterproscanJBrowse
Cassiopea xamachanaCxam_g24575.t1PF04545Sigma-70, region 4InterproscanJBrowse

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