Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 76 gene–annotation pairs matching PF04545 across 148 genomes · 8556 ms.

Species with hits:CXAMA 17HOLIG 17MGRIS 13HVIRI 6AAURI2 5HSYMB 3HIMPE 3CCRUX 2TRUBR 2CSP1 1APALM 1LSCAB 1ASP1 1MVIRU 1PMIZI 1PPAPI 1TCOCC 1
SpeciesGene IDPfam termMatchSourceBrowser
AAURI2scaffold10.g187.t1PF04545Sigma-70, region 4InterproscanJBrowse
AAURI2scaffold655.g4.t1PF04545Sigma-70, region 4InterproscanJBrowse
AAURI2scaffold228.g19.t1PF04545Sigma-70, region 4InterproscanJBrowse
AAURI2scaffold10.g96.t1PF04545Sigma-70, region 4InterproscanJBrowse
AAURI2scaffold2648.g2.t1PF04545Sigma-70, region 4InterproscanJBrowse
APALMXP_074612694.1PF04545Sigma-70, region 4InterproscanJBrowse
ASP1Acti_006273-T1PF04545Sigma-70, region 4InterproscanJBrowse
CCRUXg1015.t1PF04545Sigma-70, region 4InterproscanJBrowse
CCRUXg537.t1PF04545Sigma-70, region 4InterproscanJBrowse
CSP1Csp0G128570PF04545Sigma-70, region 4InterproscanJBrowse
CXAMACxam_g19690.t1PF04545Sigma-70, region 4InterproscanJBrowse
CXAMACxam_g11337.t1PF04545Sigma-70, region 4InterproscanJBrowse
CXAMACxam_g14783.t1PF04545Sigma-70, region 4InterproscanJBrowse
CXAMACxam_g10380.t1PF04545Sigma-70, region 4InterproscanJBrowse
CXAMACxam_g4148.t1PF04545Sigma-70, region 4InterproscanJBrowse
CXAMACxam_g10693.t1PF04545Sigma-70, region 4InterproscanJBrowse
CXAMACxam_g7566.t1PF04545Sigma-70, region 4InterproscanJBrowse
CXAMACxam_g17790.t1PF04545Sigma-70, region 4InterproscanJBrowse
CXAMACxam_g879.t1PF04545Sigma-70, region 4InterproscanJBrowse
CXAMACxam_g19232.t1PF04545Sigma-70, region 4InterproscanJBrowse
CXAMACxam_g6519.t1PF04545Sigma-70, region 4InterproscanJBrowse
CXAMACxam_g21211.t1PF04545Sigma-70, region 4InterproscanJBrowse
CXAMACxam_g11248.t1PF04545Sigma-70, region 4InterproscanJBrowse
CXAMACxam_g966.t1PF04545Sigma-70, region 4InterproscanJBrowse
CXAMACxam_g10032.t1PF04545Sigma-70, region 4InterproscanJBrowse
CXAMACxam_g3236.t1PF04545Sigma-70, region 4InterproscanJBrowse
CXAMACxam_g24575.t1PF04545Sigma-70, region 4InterproscanJBrowse
HIMPEevm.model.Chr16.358PF04545Sigma-70, region 4InterproscanJBrowse
HIMPEevm.model.Contig129.25PF04545Sigma-70, region 4InterproscanJBrowse
HIMPEevm.model.Contig136.38PF04545Sigma-70, region 4InterproscanJBrowse
HOLIGHOLI02858.G48417PF04545Sigma-70, region 4InterproscanJBrowse
HOLIGHOLI00002.G20008PF04545Sigma-70, region 4InterproscanJBrowse
HOLIGHOLI00001.G52403PF04545Sigma-70, region 4InterproscanJBrowse
HOLIGHOLI00001.G52590PF04545Sigma-70, region 4InterproscanJBrowse
HOLIGHOLI00353.G43124PF04545Sigma-70, region 4InterproscanJBrowse
HOLIGHOLI01498.G36258PF04545Sigma-70, region 4InterproscanJBrowse
HOLIGHOLI00002.G21372PF04545Sigma-70, region 4InterproscanJBrowse
HOLIGHOLI00001.G51246PF04545Sigma-70, region 4InterproscanJBrowse
HOLIGHOLI00299.G46501PF04545Sigma-70, region 4InterproscanJBrowse
HOLIGHOLI00150.G2477PF04545Sigma-70, region 4InterproscanJBrowse
HOLIGHOLI00001.G50158PF04545Sigma-70, region 4InterproscanJBrowse
HOLIGHOLI00002.G20773PF04545Sigma-70, region 4InterproscanJBrowse
HOLIGHOLI00299.G46486PF04545Sigma-70, region 4InterproscanJBrowse
HOLIGHOLI00014.G10485PF04545Sigma-70, region 4InterproscanJBrowse
HOLIGHOLI00001.G51345PF04545Sigma-70, region 4InterproscanJBrowse
HOLIGHOLI03692.G28518PF04545Sigma-70, region 4InterproscanJBrowse
HOLIGHOLI00150.G2249PF04545Sigma-70, region 4InterproscanJBrowse
HSYMBHSymV2.0_g02.02355_t1PF04545Sigma-70, region 4InterproscanJBrowse
HSYMBHSymV2.0_g02.02444_t1PF04545Sigma-70, region 4InterproscanJBrowse
HSYMBHSymV2.0_g18.25763_t1PF04545Sigma-70, region 4InterproscanJBrowse
HVIRIg20135.t1.1PF04545Sigma-70, region 4InterproscanJBrowse
HVIRIBRAKERKREP00000022924.1PF04545Sigma-70, region 4InterproscanJBrowse
HVIRIBRAKERKREP00000022387.1PF04545Sigma-70, region 4InterproscanJBrowse
HVIRIg20573.t1.1PF04545Sigma-70, region 4InterproscanJBrowse
HVIRIBRAKERKREP00000023269.1PF04545Sigma-70, region 4InterproscanJBrowse
HVIRIg20858.t1.1PF04545Sigma-70, region 4InterproscanJBrowse
LSCABANN35065-RAPF04545Sigma-70, region 4InterproscanJBrowse
MGRISANN35275-RAPF04545Sigma-70, region 4InterproscanJBrowse
MGRISANN20731-RAPF04545Sigma-70, region 4InterproscanJBrowse
MGRISANN22588-RAPF04545Sigma-70, region 4InterproscanJBrowse
MGRISANN26820-RAPF04545Sigma-70, region 4InterproscanJBrowse
MGRISANN25129-RAPF04545Sigma-70, region 4InterproscanJBrowse
MGRISANN27083-RAPF04545Sigma-70, region 4InterproscanJBrowse
MGRISANN32715-RAPF04545Sigma-70, region 4InterproscanJBrowse
MGRISANN30204-RAPF04545Sigma-70, region 4InterproscanJBrowse
MGRISANN27508-RAPF04545Sigma-70, region 4InterproscanJBrowse
MGRISANN29521-RAPF04545Sigma-70, region 4InterproscanJBrowse
MGRISANN25146-RAPF04545Sigma-70, region 4InterproscanJBrowse
MGRISANN39023-RAPF04545Sigma-70, region 4InterproscanJBrowse
MGRISANN24719-RAPF04545Sigma-70, region 4InterproscanJBrowse
MVIRUscaffold121.g266.t1PF04545Sigma-70, region 4InterproscanJBrowse
PMIZIc2224.g005.t1.p1PF04545Sigma-70, region 4InterproscanJBrowse
PPAPIPpa0G146780PF04545Sigma-70, region 4InterproscanJBrowse
TCOCCTcoG020697.mRNA1PF04545Sigma-70, region 4InterproscanJBrowse
TRUBRg4076.t1.1PF04545Sigma-70, region 4InterproscanJBrowse
TRUBRBRAKERIOWP00000001495.1PF04545Sigma-70, region 4InterproscanJBrowse

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