Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 4 gene–annotation pairs matching PF04589 across 148 genomes · 7784 ms.

Species with hits:Callogorgia gracilis 2Diadumene lineata 1Nematostella vectensis 1
SpeciesGene IDPfam termMatchSourceBrowser
Callogorgia gracilisENSFVQP00000019086.1PF04589RFX1 transcription activation region InterproscanJBrowse
Callogorgia gracilisENSFVQP00000019068.1PF04589RFX1 transcription activation region InterproscanJBrowse
Diadumene lineataENSDLIP00000021666.1PF04589RFX1 transcription activation region InterproscanJBrowse
Nematostella vectensisXP_032241540.2PF04589RFX1 transcription activation region InterproscanJBrowse

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