Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 9 gene–annotation pairs matching PF06835 across 148 genomes · 8 ms.

Species with hits:Hydra oligactis 3Montipora grisea 3Aurelia aurita complex sp. Pacific 1Hydra viridissima 1Stylophora pistillata 1
SpeciesGene IDPfam termMatchSourceBrowser
Aurelia aurita complex sp. Pacificscaffold10.g235.t1PF06835Lipopolysaccharide-assembly, LptC-relatedInterproscanJBrowse
Hydra oligactisHOLI00001.G53814PF06835Lipopolysaccharide-assembly, LptC-relatedInterproscanJBrowse
Hydra oligactisHOLI00014.G9866PF06835Lipopolysaccharide-assembly, LptC-relatedInterproscanJBrowse
Hydra oligactisHOLI00002.G20966PF06835Lipopolysaccharide-assembly, LptC-relatedInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000022840.1PF06835Lipopolysaccharide-assembly, LptC-relatedInterproscanJBrowse
Montipora griseaANN22138-RAPF06835Lipopolysaccharide-assembly, LptC-relatedInterproscanJBrowse
Montipora griseaANN22138-RAPF06835Lipopolysaccharide-assembly, LptC-relatedInterproscanJBrowse
Montipora griseaANN21015-RAPF06835Lipopolysaccharide-assembly, LptC-relatedInterproscanJBrowse
Stylophora pistillataPFX11144.1PF06835Lipopolysaccharide-assembly, LptC-relatedInterproscanJBrowse

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