Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 20 gene–annotation pairs matching PF08277 across 148 genomes · 8556 ms.

Species with hits:BCFM 3CHEMI 3CMOSA 3CQUIN 2HECHI 2AAURI1 1AAURI2 1ASP3 1MPAPU 1SMALA 1TRENI 1TRUBR 1
SpeciesGene IDPfam termMatchSourceBrowser
AAURI1scaffold127.g59.t1PF08277PAN-like domainInterproscanJBrowse
AAURI2scaffold753.g11.t1PF08277PAN-like domainInterproscanJBrowse
ASP34_ENSDKXP00000021798.1PF08277PAN-like domainInterproscanJBrowse
BCFMM_g22209.t1PF08277PAN-like domainInterproscanJBrowse
BCFMM_g21589.t1PF08277PAN-like domainInterproscanJBrowse
BCFMM_g40690.t1PF08277PAN-like domainInterproscanJBrowse
CHEMIXP_066934662.1PF08277PAN-like domainInterproscanJBrowse
CHEMIXP_066927275.1PF08277PAN-like domainInterproscanJBrowse
CHEMIXP_066918057.1PF08277PAN-like domainInterproscanJBrowse
CMOSAENSSJYP00000010423.1PF08277PAN-like domainInterproscanJBrowse
CMOSAENSSJYP00000003980.1PF08277PAN-like domainInterproscanJBrowse
CMOSAENSSJYP00000007331.1PF08277PAN-like domainInterproscanJBrowse
CQUINevm.model.HiC_scaffold_16.493PF08277PAN-like domainInterproscanJBrowse
CQUINevm.model.HiC_scaffold_16.547PF08277PAN-like domainInterproscanJBrowse
HECHIENSDJXP00000055031.1PF08277PAN-like domainInterproscanJBrowse
HECHIENSDJXP00000002440.1PF08277PAN-like domainInterproscanJBrowse
MPAPUBRAKERKYLP00000005171.1PF08277PAN-like domainInterproscanJBrowse
SMALAENSXQXP00000029795.1PF08277PAN-like domainInterproscanJBrowse
TRENIENSHNZP00000009796.1PF08277PAN-like domainInterproscanJBrowse
TRUBRBRAKERIOWP00000009341.1PF08277PAN-like domainInterproscanJBrowse

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