Functional Domain Search

Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterPro Pfam KEGG pathway Gene Ontology PANTHER

Examples: IPR016024 PF12848 K13752 homeobox · matching is exact on the identifier and partial on the description.

Found 9 gene–annotation pairs matching PF09157 across 148 genomes · 7 ms.

Species with hits:Montipora grisea 5 Hydra oligactis 3 Aurelia aurita complex sp. Pacific 1

Species	Gene ID	Pfam term	Match	Source	Browser
Aurelia aurita complex sp. Pacific	scaffold10.g154.t1	PF09157	Pseudouridine synthase II TruB, C-terminal	Interproscan	JBrowse
Hydra oligactis	HOLI00001.G52119	PF09157	Pseudouridine synthase II TruB, C-terminal	Interproscan	JBrowse
Hydra oligactis	HOLI00655.G57013	PF09157	Pseudouridine synthase II TruB, C-terminal	Interproscan	JBrowse
Hydra oligactis	HOLI00522.G17048	PF09157	Pseudouridine synthase II TruB, C-terminal	Interproscan	JBrowse
Montipora grisea	ANN25745-RA	PF09157	Pseudouridine synthase II TruB, C-terminal	Interproscan	JBrowse
Montipora grisea	ANN29877-RA	PF09157	Pseudouridine synthase II TruB, C-terminal	Interproscan	JBrowse
Montipora grisea	ANN20991-RA	PF09157	Pseudouridine synthase II TruB, C-terminal	Interproscan	JBrowse
Montipora grisea	ANN25635-RA	PF09157	Pseudouridine synthase II TruB, C-terminal	Interproscan	JBrowse
Montipora grisea	ANN28885-RA	PF09157	Pseudouridine synthase II TruB, C-terminal	Interproscan	JBrowse