Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 4 gene–annotation pairs matching PF10414 across 148 genomes · 22 ms.

Species with hits:Aurelia aurita complex sp. Pacific 1Actinernus sp. WN-2022 1Hydra oligactis 1Leptoseris scabra 1
SpeciesGene IDPfam termMatchSourceBrowser
Aurelia aurita complex sp. Pacificscaffold1109.g18.t1PF10414Sirohaem synthase dimerisation regionInterproscanJBrowse
Actinernus sp. WN-2022Acti_006371-T1PF10414Sirohaem synthase dimerisation regionInterproscanJBrowse
Hydra oligactisHOLI00001.G50837PF10414Sirohaem synthase dimerisation regionInterproscanJBrowse
Leptoseris scabraANN35131-RAPF10414Sirohaem synthase dimerisation regionInterproscanJBrowse

TOP