Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 7 gene–annotation pairs matching PF12626 across 148 genomes · 10 ms.

Species with hits:Hydra oligactis 4Aurelia aurita complex sp. Pacific 1Hydra viridissima 1Montipora grisea 1
SpeciesGene IDPfam termMatchSourceBrowser
Aurelia aurita complex sp. Pacificscaffold10.g170.t1PF12626Polymerase A arginine-rich C-terminusInterproscanJBrowse
Hydra oligactisHOLI00353.G43301PF12626Polymerase A arginine-rich C-terminusInterproscanJBrowse
Hydra oligactisHOLI02969.G47675PF12626Polymerase A arginine-rich C-terminusInterproscanJBrowse
Hydra oligactisHOLI00001.G52105PF12626Polymerase A arginine-rich C-terminusInterproscanJBrowse
Hydra oligactisHOLI00150.G2012PF12626Polymerase A arginine-rich C-terminusInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000023127.1PF12626Polymerase A arginine-rich C-terminusInterproscanJBrowse
Montipora griseaANN20967-RAPF12626Polymerase A arginine-rich C-terminusInterproscanJBrowse

TOP