Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 8 gene–annotation pairs matching PF17201 across 148 genomes · 54 ms.

Species with hits:Hydra oligactis 5Aurelia aurita complex sp. Pacific 2Montipora grisea 1
SpeciesGene IDPfam termMatchSourceBrowser
Aurelia aurita complex sp. Pacificscaffold10.g77.t1PF17201Cache 3/Cache 2 fusion domainInterproscanJBrowse
Aurelia aurita complex sp. Pacificscaffold272.g9.t1PF17201Cache 3/Cache 2 fusion domainInterproscanJBrowse
Hydra oligactisHOLI00643.G15852PF17201Cache 3/Cache 2 fusion domainInterproscanJBrowse
Hydra oligactisHOLI01937.G38253PF17201Cache 3/Cache 2 fusion domainInterproscanJBrowse
Hydra oligactisHOLI00001.G52727PF17201Cache 3/Cache 2 fusion domainInterproscanJBrowse
Hydra oligactisHOLI00059.G25937PF17201Cache 3/Cache 2 fusion domainInterproscanJBrowse
Hydra oligactisHOLI00014.G9471PF17201Cache 3/Cache 2 fusion domainInterproscanJBrowse
Montipora griseaANN20915-RAPF17201Cache 3/Cache 2 fusion domainInterproscanJBrowse

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