Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 6 gene–annotation pairs matching PF18574 across 148 genomes · 28 ms.

Species with hits:Eunicella cavolini 2Aurelia aurita 1Stephanocoenia intersepta 1Siderastrea radians 1Siderastrea siderea 1
SpeciesGene IDPfam termMatchSourceBrowser
Aurelia auritascaffold18.g21.t1PF18574C2HC Zing finger domainInterproscanJBrowse
Eunicella cavoliniENSLDHP00000022628.1PF18574C2HC Zing finger domainInterproscanJBrowse
Eunicella cavoliniENSLDHP00000006576.1PF18574C2HC Zing finger domainInterproscanJBrowse
Stephanocoenia interseptaENSDDJP00000017055.1PF18574C2HC Zing finger domainInterproscanJBrowse
Siderastrea radiansENSTHXP00000072486.1PF18574C2HC Zing finger domainInterproscanJBrowse
Siderastrea sidereaFUN_021033-T1PF18574C2HC Zing finger domainInterproscanJBrowse

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