Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 7 gene–annotation pairs matching PF21517 across 148 genomes · 5924 ms.

Species with hits:Hydra vulgaris 5Hydra viridissima 2
SpeciesGene IDPfam termMatchSourceBrowser
Hydra viridissimaBRAKERKREP00000018698.1PF21517Transposable element Tc3 transposase, HTHInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000017479.1PF21517Transposable element Tc3 transposase, HTHInterproscanJBrowse
Hydra vulgarisXP_065662431.1PF21517Transposable element Tc3 transposase, HTHInterproscanJBrowse
Hydra vulgarisXP_065652839.1PF21517Transposable element Tc3 transposase, HTHInterproscanJBrowse
Hydra vulgarisXP_065658175.1PF21517Transposable element Tc3 transposase, HTHInterproscanJBrowse
Hydra vulgarisXP_065642767.1PF21517Transposable element Tc3 transposase, HTHInterproscanJBrowse
Hydra vulgarisXP_065642379.1PF21517Transposable element Tc3 transposase, HTHInterproscanJBrowse

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