← Back to the gene family browser
Support counts the member genes carrying the term. % of genes is that count over all 437 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR14003 | TRANSCRIPTIONAL REPRESSOR PROTEIN YY | 234 / 437 | 53.6% | 64.5% of 363 | ≥50% support |
| Pfam | PF00096 | zf-C2H2 — Zinc finger, C2H2 type | 347 / 437 | 79.4% | 98.9% of 351 | ≥50% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 311 / 437 | 71.2% | 91.7% of 339 | ≥50% support |
| GO | GO:0000978 Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | 309 / 437 | 70.7% | 91.2% of 339 | ≥50% support |
| GO | GO:0000981 Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | 287 / 437 | 65.7% | 84.7% of 339 | ≥50% support |
| GO | GO:0000790 Cellular Component | chromatin | 234 / 437 | 53.6% | 69.0% of 339 | ≥50% support |
| GO | GO:0005667 Cellular Component | transcription regulator complex | 234 / 437 | 53.6% | 69.0% of 339 | ≥50% support |
| GO | GO:0031519 Cellular Component | PcG protein complex | 234 / 437 | 53.6% | 69.0% of 339 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Alatina alata | Aala_g115.t1 | MCP4459908.1 | hypothetical protein [Cytophagales bacterium] | Q9UPW0 Forkhead box protein J3 OS=Homo sapiens OX=9606 GN=FOXJ3 PE= | JBrowse |
| Alatina alata | Aala_g1665.t1 | XP_047135141.1 | uncharacterized protein LOC124812462 [Hydra vulgaris] | P98192 Dihydroxyacetone phosphate acyltransferase OS=Mus musculus O | JBrowse |
| Alatina alata | Aala_g358.t1 | XP_038055161.1 | craniofacial development protein 2-like [Patiria miniata] | O02751 Craniofacial development protein 2 OS=Bos taurus OX=9913 GN= | JBrowse |
