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Support counts the member genes carrying the term. % of genes is that count over all 781 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00176 | SNF2-rel_dom — SNF2-related domain | 592 / 781 | 75.8% | 89.7% of 660 | ≥50% support |
| Pfam | PF00271 | Helicase_C — Helicase conserved C-terminal domain | 530 / 781 | 67.9% | 80.3% of 660 | ≥50% support |
| GO | GO:0140658 Molecular Function | ATP-dependent chromatin remodeler activity | 599 / 781 | 76.7% | 86.3% of 694 | ≥50% support |
| GO | GO:0005524 Molecular Function | ATP binding | 593 / 781 | 75.9% | 85.5% of 694 | ≥50% support |
| GO | GO:0005634 Cellular Component | nucleus | 498 / 781 | 63.8% | 71.8% of 694 | ≥50% support |
| GO | GO:0006338 Biological Process | chromatin remodeling | 418 / 781 | 53.5% | 60.2% of 694 | ≥50% support |
| GO | GO:0003682 Molecular Function | chromatin binding | 405 / 781 | 51.9% | 58.4% of 694 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora gemmifera | agem_s0060.g51.t1 | XP_044168829.1 | chromodomain-helicase-DNA-binding protein 1-like isoform X2 [Acropora millepora] | Q7ZU90 Chromodomain-helicase-DNA-binding protein 1-like OS=Danio re | JBrowse |
| Acropora gemmifera | agem_s0060.g51.t2 | XP_044168830.1 | chromodomain-helicase-DNA-binding protein 1-like isoform X3 [Acropora millepora] | Q7ZU90 Chromodomain-helicase-DNA-binding protein 1-like OS=Danio re | JBrowse |
| Acropora gemmifera | agem_s0145.g2.t1 | XP_044177135.1 | LOW QUALITY PROTEIN: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5-like [Acropora millepora] | Q91ZW3 SWI/SNF-related matrix-associated actin-dependent regulator | JBrowse |
| Acropora gemmifera | agem_s0185.g4.t1 | XP_029209402.2 | LOW QUALITY PROTEIN: lymphocyte-specific helicase-like [Acropora millepora] | Q9NRZ9 Lymphoid-specific helicase OS=Homo sapiens OX=9606 GN=HELLS | JBrowse |
| Acropora gemmifera | agem_s0185.g4.t2 | XP_029209402.2 | LOW QUALITY PROTEIN: lymphocyte-specific helicase-like [Acropora millepora] | Q9NRZ9 Lymphoid-specific helicase OS=Homo sapiens OX=9606 GN=HELLS | JBrowse |
| Acropora gemmifera | agem_s0185.g4.t3 | XP_029209402.2 | LOW QUALITY PROTEIN: lymphocyte-specific helicase-like [Acropora millepora] | Q9NRZ9 Lymphoid-specific helicase OS=Homo sapiens OX=9606 GN=HELLS | JBrowse |
| Acropora gemmifera | agem_s0244.g18.t1 | XP_044177135.1 | LOW QUALITY PROTEIN: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5-like [Acropora millepora] | Q91ZW3 SWI/SNF-related matrix-associated actin-dependent regulator | JBrowse |
