Gene Family

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Orthogroup

OG0007702

View gene tree Interactive tree, one tip per member sequence
Member genes
194
Species
136
Sequences
194
Best annotation support
84.5%
Downloads ⬇ Alignment (FASTA.gz) ⬇ Sequences (FASTA)

Consensus functional annotation

No term is shared by every member gene — the best-supported term below covers 84.5% of the 194 members.

Support counts the member genes carrying the term. % of genes is that count over all 194 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.

Source Term Name / description Support % of genes % annotated Consistency
PANTHERPTHR11800DNA-DIRECTED RNA POLYMERASE164 / 19484.5%98.8%
of 166		≥80% support
PfamPF01193RNA_pol_L — RNA polymerase Rpb3/Rpb11 dimerisation domain165 / 19485.1%98.2%
of 168		≥80% support
GOGO:0006351
Biological Process		DNA-templated transcription172 / 19488.7%100.0%
of 172		≥80% support
GOGO:0046983
Molecular Function		protein dimerization activity172 / 19488.7%100.0%
of 172		≥80% support
GOGO:0003899
Molecular Function		DNA-directed 5'-3' RNA polymerase activity170 / 19487.6%98.8%
of 172		≥80% support
GOGO:0001055
Molecular Function		RNA polymerase II activity164 / 19484.5%95.4%
of 172		≥80% support
GOGO:0005665
Cellular Component		RNA polymerase II, core complex164 / 19484.5%95.4%
of 172		≥80% support
PfamPF01000RNA_pol_A_bac — RNA polymerase Rpb3/RpoA insert domain154 / 19479.4%91.7%
of 168		≥50% support
GOGO:0003677
Molecular Function		DNA binding126 / 19465.0%73.3%
of 172		≥50% support
KEGGK03011RPB3, POLR2C — DNA repair and recombination proteins143 / 19473.7%98.6%
of 145		≥50% support
📊 Total members in OG0007702: 1 (filtered to AMICR · show all species)
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Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.

Species Gene ID Top NCBI-NR hit
(accession)		 Top NCBI-NR hit description
(source organism)		 Top UniProt hit
(Swiss-Prot)		 Genome browser
Acropora microphthalmaamic_s0112.g83.t1XP_044175250.1DNA-directed RNA polymerase II subunit RPB3-like [Acropora millepora]Q3T0Q3
DNA-directed RNA polymerase II subunit RPB3 OS=Bos taurus OX		JBrowse
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