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Support counts the member genes carrying the term. % of genes is that count over all 194 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR11800 | DNA-DIRECTED RNA POLYMERASE | 164 / 194 | 84.5% | 98.8% of 166 | ≥80% support |
| Pfam | PF01193 | RNA_pol_L — RNA polymerase Rpb3/Rpb11 dimerisation domain | 165 / 194 | 85.1% | 98.2% of 168 | ≥80% support |
| GO | GO:0006351 Biological Process | DNA-templated transcription | 172 / 194 | 88.7% | 100.0% of 172 | ≥80% support |
| GO | GO:0046983 Molecular Function | protein dimerization activity | 172 / 194 | 88.7% | 100.0% of 172 | ≥80% support |
| GO | GO:0003899 Molecular Function | DNA-directed 5'-3' RNA polymerase activity | 170 / 194 | 87.6% | 98.8% of 172 | ≥80% support |
| GO | GO:0001055 Molecular Function | RNA polymerase II activity | 164 / 194 | 84.5% | 95.4% of 172 | ≥80% support |
| GO | GO:0005665 Cellular Component | RNA polymerase II, core complex | 164 / 194 | 84.5% | 95.4% of 172 | ≥80% support |
| Pfam | PF01000 | RNA_pol_A_bac — RNA polymerase Rpb3/RpoA insert domain | 154 / 194 | 79.4% | 91.7% of 168 | ≥50% support |
| GO | GO:0003677 Molecular Function | DNA binding | 126 / 194 | 65.0% | 73.3% of 172 | ≥50% support |
| KEGG | K03011 | RPB3, POLR2C — DNA repair and recombination proteins | 143 / 194 | 73.7% | 98.6% of 145 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Aurelia aurita | scaffold2.g119.t1 | none | – | JBrowse | |
| Aurelia aurita | scaffold2.g119.t2 | none | – | JBrowse | |
| Acropora austera | ENSKKQP00000024972.1 | XP_044175250.1 | DNA-directed RNA polymerase II subunit RPB3-like [Acropora millepora] | P19387 DNA-directed RNA polymerase II subunit RPB3 OS=Homo sapiens | JBrowse |
| Acropora awi | aawi_s0004.g266.t1 | XP_044175250.1 | DNA-directed RNA polymerase II subunit RPB3-like [Acropora millepora] | P19387 DNA-directed RNA polymerase II subunit RPB3 OS=Homo sapiens | JBrowse |
| Acropora cytherea | acyt_s0148.g61.t1 | XP_044175250.1 | DNA-directed RNA polymerase II subunit RPB3-like [Acropora millepora] | Q3T0Q3 DNA-directed RNA polymerase II subunit RPB3 OS=Bos taurus OX | JBrowse |
| Acropora digitifera | chr4Alt.g7940.t1 | none | – | JBrowse | |
| Actinia equina | EGACTEQ4350016952-PA | XP_031560873.1 | DNA-directed RNA polymerase II subunit RPB3-like [Actinia tenebrosa] | P97760 DNA-directed RNA polymerase II subunit RPB3 OS=Mus musculus | JBrowse |
| Actinia equina | EGACTEQ4350032310-PA | XP_031560873.1 | DNA-directed RNA polymerase II subunit RPB3-like [Actinia tenebrosa] | P97760 DNA-directed RNA polymerase II subunit RPB3 OS=Mus musculus | JBrowse |
| Acropora gemmifera | agem_s0196.g44.t1 | XP_044175250.1 | DNA-directed RNA polymerase II subunit RPB3-like [Acropora millepora] | P19387 DNA-directed RNA polymerase II subunit RPB3 OS=Homo sapiens | JBrowse |
| Acropora gemmifera | agem_s0196.g44.t2 | XP_044175250.1 | DNA-directed RNA polymerase II subunit RPB3-like [Acropora millepora] | Q3T0Q3 DNA-directed RNA polymerase II subunit RPB3 OS=Bos taurus OX | JBrowse |
| Acropora gemmifera | agem_s0196.g44.t3 | XP_015754784.1 | PREDICTED: DNA-directed RNA polymerase II subunit RPB3-like, partial [Acropora digitifera] | P19387 DNA-directed RNA polymerase II subunit RPB3 OS=Homo sapiens | JBrowse |
| Acropora hemprichii | Ahemp_009263-T1 | XP_044175250.1 | DNA-directed RNA polymerase II subunit RPB3-like [Acropora millepora] | P19387 DNA-directed RNA polymerase II subunit RPB3 OS=Homo sapiens | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g24244 | XP_020915618.1 | DNA-directed RNA polymerase II subunit RPB3 [Exaiptasia diaphana] | Q3T0Q3 DNA-directed RNA polymerase II subunit RPB3 OS=Bos taurus OX | JBrowse |
| Acropora intermedia | aint_s0493.g11.t1 | XP_044175250.1 | DNA-directed RNA polymerase II subunit RPB3-like [Acropora millepora] | P97760 DNA-directed RNA polymerase II subunit RPB3 OS=Mus musculus | JBrowse |
| Actinoscyphia liui | gene02334.t1 | XP_020915618.1 | DNA-directed RNA polymerase II subunit RPB3 [Exaiptasia diaphana] | Q3T0Q3 DNA-directed RNA polymerase II subunit RPB3 OS=Bos taurus OX | JBrowse |
| Acropora loripes | alor_g1926.t1 | XP_044175250.1 | DNA-directed RNA polymerase II subunit RPB3-like [Acropora millepora] | P19387 DNA-directed RNA polymerase II subunit RPB3 OS=Homo sapiens | JBrowse |
| Actinia mediterranea | ENSQPTP00000025955.1 | none | – | JBrowse | |
| Actinia mediterranea | ENSQPTP00000025968.1 | XP_031560873.1 | DNA-directed RNA polymerase II subunit RPB3-like [Actinia tenebrosa] | P97760 DNA-directed RNA polymerase II subunit RPB3 OS=Mus musculus | JBrowse |
| Actinia mediterranea | ENSQPTP00000025980.1 | none | – | JBrowse | |
| Actinia mediterranea | ENSQPTP00000060668.1 | none | – | JBrowse |
