← Back to the gene family browser
Support counts the member genes carrying the term. % of genes is that count over all 233 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR46918 | SYNAPTONEMAL COMPLEX PROTEIN 1 | 161 / 233 | 69.1% | 95.3% of 169 | ≥50% support |
| Pfam | PF05483 | SCP-1 | 135 / 233 | 57.9% | 99.3% of 136 | ≥50% support |
| GO | GO:0000795 Cellular Component | synaptonemal complex | 164 / 233 | 70.4% | 99.4% of 165 | ≥50% support |
| GO | GO:0007130 Biological Process | synaptonemal complex assembly | 164 / 233 | 70.4% | 99.4% of 165 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Astreopora myriophthalma | BRAKERYMEP00000004240.1 | CAH3104597.1 | unnamed protein product [Pocillopora meandrina] | Q03410 Synaptonemal complex protein 1 OS=Rattus norvegicus OX=10116 | JBrowse |
| Astreopora myriophthalma | BRAKERYMEP00000004241.1 | CAH3104597.1 | unnamed protein product [Pocillopora meandrina] | Q03410 Synaptonemal complex protein 1 OS=Rattus norvegicus OX=10116 | JBrowse |
| Astreopora myriophthalma | g2172.t1.1 | none | – | JBrowse | |
| Astreopora myriophthalma | g2172.t2.1 | none | – | JBrowse |
