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This orthogroup contains 103 genes from 89 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 103 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR10270 | SOX TRANSCRIPTION FACTOR | 98 / 103 | 95.2% | 100.0% of 98 | ≥80% support |
| Pfam | PF00505 | HMG_box — HMG (high mobility group) box | 98 / 103 | 95.2% | 100.0% of 98 | ≥80% support |
| GO | GO:0000978 Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | 92 / 103 | 89.3% | 100.0% of 92 | ≥80% support |
| GO | GO:0000981 Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | 92 / 103 | 89.3% | 100.0% of 92 | ≥80% support |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 92 / 103 | 89.3% | 100.0% of 92 | ≥80% support |
| GO | GO:0009653 Biological Process | anatomical structure morphogenesis | 92 / 103 | 89.3% | 100.0% of 92 | ≥80% support |
| GO | GO:0030154 Biological Process | cell differentiation | 92 / 103 | 89.3% | 100.0% of 92 | ≥80% support |
| KEGG | K09267 | SOX1S — Transcription factors | 90 / 103 | 87.4% | 100.0% of 90 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora pulchra | FUN_012414-T1 | XP_029203013.2 | sex-determining region Y protein-like [Acropora millepora] | Q04892 Transcription factor SOX-14 OS=Mus musculus OX=10090 GN=Sox1 | JBrowse |
