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This orthogroup contains 103 genes from 89 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 103 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR10270 | SOX TRANSCRIPTION FACTOR | 98 / 103 | 95.2% | 100.0% of 98 | ≥80% support |
| Pfam | PF00505 | HMG_box — HMG (high mobility group) box | 98 / 103 | 95.2% | 100.0% of 98 | ≥80% support |
| GO | GO:0000978 Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | 92 / 103 | 89.3% | 100.0% of 92 | ≥80% support |
| GO | GO:0000981 Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | 92 / 103 | 89.3% | 100.0% of 92 | ≥80% support |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 92 / 103 | 89.3% | 100.0% of 92 | ≥80% support |
| GO | GO:0009653 Biological Process | anatomical structure morphogenesis | 92 / 103 | 89.3% | 100.0% of 92 | ≥80% support |
| GO | GO:0030154 Biological Process | cell differentiation | 92 / 103 | 89.3% | 100.0% of 92 | ≥80% support |
| KEGG | K09267 | SOX1S — Transcription factors | 90 / 103 | 87.4% | 100.0% of 90 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora austera | ENSKKQP00000003946.1 | XP_029203013.2 | sex-determining region Y protein-like [Acropora millepora] | Q04892 Transcription factor SOX-14 OS=Mus musculus OX=10090 GN=Sox1 | JBrowse |
| Acropora austera | ENSKKQP00000010629.1 | XP_029203013.2 | sex-determining region Y protein-like [Acropora millepora] | Q04892 Transcription factor SOX-14 OS=Mus musculus OX=10090 GN=Sox1 | JBrowse |
| Acropora cervicornis | KAK2558058.1 | XP_029203013.2 | sex-determining region Y protein-like [Acropora millepora] | Q04892 Transcription factor SOX-14 OS=Mus musculus OX=10090 GN=Sox1 | JBrowse |
| Acropora digitifera | chr12Alt.g25632.t1 | none | – | JBrowse | |
| Actinia equina | EGACTEQ4350012109-PA | XP_031557764.1 | sex-determining region Y protein-like [Actinia tenebrosa] | Q6P0E1 Transcription factor Sox-2 OS=Danio rerio OX=7955 GN=sox2 PE | JBrowse |
| Acropora hemprichii | Ahemp_001485-T1 | XP_029203013.2 | sex-determining region Y protein-like [Acropora millepora] | Q04892 Transcription factor SOX-14 OS=Mus musculus OX=10090 GN=Sox1 | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g4720 | XP_031557764.1 | sex-determining region Y protein-like [Actinia tenebrosa] | Q20201 Transcription factor sox-3 OS=Caenorhabditis elegans OX=6239 | JBrowse |
| Actinoscyphia liui | gene28992.t1 | XP_020911306.1 | sex-determining region Y protein [Exaiptasia diaphana] | Q20201 Transcription factor sox-3 OS=Caenorhabditis elegans OX=6239 | JBrowse |
| Acropora loripes | alor_g23552.t1 | XP_029203013.2 | sex-determining region Y protein-like [Acropora millepora] | Q04892 Transcription factor SOX-14 OS=Mus musculus OX=10090 GN=Sox1 | JBrowse |
| Actinia mediterranea | ENSQPTP00000016835.1 | XP_031557764.1 | sex-determining region Y protein-like [Actinia tenebrosa] | Q6P0E1 Transcription factor Sox-2 OS=Danio rerio OX=7955 GN=sox2 PE | JBrowse |
| Actinia mediterranea | ENSQPTP00000054432.1 | XP_031557764.1 | sex-determining region Y protein-like [Actinia tenebrosa] | Q6P0E1 Transcription factor Sox-2 OS=Danio rerio OX=7955 GN=sox2 PE | JBrowse |
| Acropora millepora | XP_029203013.2 | XP_029203013.2 | sex-determining region Y protein-like [Acropora millepora] | Q04892 Transcription factor SOX-14 OS=Mus musculus OX=10090 GN=Sox1 | JBrowse |
| Astreopora myriophthalma | BRAKERYMEP00000024422.1 | XP_029203013.2 | sex-determining region Y protein-like [Acropora millepora] | O95416 Transcription factor SOX-14 OS=Homo sapiens OX=9606 GN=SOX14 | JBrowse |
| Astreopora myriophthalma | g22635.t1.1 | none | – | JBrowse | |
| Acropora palmata | XP_074624765.1 | XP_029203013.2 | sex-determining region Y protein-like [Acropora millepora] | Q04892 Transcription factor SOX-14 OS=Mus musculus OX=10090 GN=Sox1 | JBrowse |
| Astrangia poculata | evm.model.Ap6.2841 | KAJ7385709.1 | hypothetical protein OS493_013740 [Desmophyllum pertusum] | Q9W7R6 Transcription factor SOX-14 OS=Gallus gallus OX=9031 GN=SOX1 | JBrowse |
| Acropora pulchra | FUN_012414-T1 | XP_029203013.2 | sex-determining region Y protein-like [Acropora millepora] | Q04892 Transcription factor SOX-14 OS=Mus musculus OX=10090 GN=Sox1 | JBrowse |
| Actinernus sp. WN-2022 | Acti_028767-T1 | none | – | JBrowse | |
| Actinostola sp. cb2023 | Actinostola_03217 | none | – | JBrowse | |
| Acropora spathulata | ENSEWQP00005014731.1 | XP_029203013.2 | sex-determining region Y protein-like [Acropora millepora] | B0ZTE2 Transcription factor Sox-14 OS=Xenopus laevis OX=8355 GN=sox | JBrowse |
