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This orthogroup contains 123 genes from 87 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 123 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00028 | Cadherin | 113 / 123 | 91.9% | 100.0% of 113 | ≥80% support |
| GO | GO:0005509 Molecular Function | calcium ion binding | 113 / 123 | 91.9% | 100.0% of 113 | ≥80% support |
| GO | GO:0007156 Biological Process | homophilic cell adhesion via plasma membrane adhesion molecules | 113 / 123 | 91.9% | 100.0% of 113 | ≥80% support |
| GO | GO:0016020 Cellular Component | membrane | 113 / 123 | 91.9% | 100.0% of 113 | ≥80% support |
| GO | GO:0005886 Cellular Component | plasma membrane | 112 / 123 | 91.1% | 99.1% of 113 | ≥80% support |
| GO | GO:0007155 Biological Process | cell adhesion | 112 / 123 | 91.1% | 99.1% of 113 | ≥80% support |
| PANTHER | PTHR24028 | CADHERIN-87A | 74 / 123 | 60.2% | 65.5% of 113 | ≥50% support |
| GO | GO:0005887 Cellular Component | plasma membrane | 74 / 123 | 60.2% | 65.5% of 113 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Anthopleura xanthogrammica | ENSOJPP00000000503.1 | XP_031569953.1 | protocadherin-19-like [Actinia tenebrosa] | Q9NPG4 Protocadherin-12 OS=Homo sapiens OX=9606 GN=PCDH12 PE=1 SV=1 | JBrowse |
| Anthopleura xanthogrammica | ENSOJPP00000000509.1 | XP_031569953.1 | protocadherin-19-like [Actinia tenebrosa] | Q9NPG4 Protocadherin-12 OS=Homo sapiens OX=9606 GN=PCDH12 PE=1 SV=1 | JBrowse |
