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This orthogroup contains 123 genes from 87 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 123 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00028 | Cadherin | 113 / 123 | 91.9% | 100.0% of 113 | ≥80% support |
| GO | GO:0005509 Molecular Function | calcium ion binding | 113 / 123 | 91.9% | 100.0% of 113 | ≥80% support |
| GO | GO:0007156 Biological Process | homophilic cell adhesion via plasma membrane adhesion molecules | 113 / 123 | 91.9% | 100.0% of 113 | ≥80% support |
| GO | GO:0016020 Cellular Component | membrane | 113 / 123 | 91.9% | 100.0% of 113 | ≥80% support |
| GO | GO:0005886 Cellular Component | plasma membrane | 112 / 123 | 91.1% | 99.1% of 113 | ≥80% support |
| GO | GO:0007155 Biological Process | cell adhesion | 112 / 123 | 91.1% | 99.1% of 113 | ≥80% support |
| PANTHER | PTHR24028 | CADHERIN-87A | 74 / 123 | 60.2% | 65.5% of 113 | ≥50% support |
| GO | GO:0005887 Cellular Component | plasma membrane | 74 / 123 | 60.2% | 65.5% of 113 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora acuminata | aacu_s0010.g90.t1 | XP_029199021.2 | protocadherin Fat 4-like [Acropora millepora] | Q9HC56 Protocadherin-9 OS=Homo sapiens OX=9606 GN=PCDH9 PE=1 SV=2 | JBrowse |
| Acropora awi | aawi_s0011.g16.t1 | XP_029199021.2 | protocadherin Fat 4-like [Acropora millepora] | Q9HC56 Protocadherin-9 OS=Homo sapiens OX=9606 GN=PCDH9 PE=1 SV=2 | JBrowse |
| Acropora cervicornis | KAK2553336.1 | XP_029199021.2 | protocadherin Fat 4-like [Acropora millepora] | Q9HC56 Protocadherin-9 OS=Homo sapiens OX=9606 GN=PCDH9 PE=1 SV=2 | JBrowse |
| Acropora cytherea | acyt_s0012.g163.t1 | XP_029199021.2 | protocadherin Fat 4-like [Acropora millepora] | Q9HC56 Protocadherin-9 OS=Homo sapiens OX=9606 GN=PCDH9 PE=1 SV=2 | JBrowse |
| Acropora digitifera | chr5Alt.g11911.t1 | none | – | JBrowse | |
| Acropora echinata | aech_s0071.g33.t1 | XP_029199021.2 | protocadherin Fat 4-like [Acropora millepora] | Q9HC56 Protocadherin-9 OS=Homo sapiens OX=9606 GN=PCDH9 PE=1 SV=2 | JBrowse |
| Actinia equina | EGACTEQ4350040310-PA | XP_031569953.1 | protocadherin-19-like [Actinia tenebrosa] | E9PVD3 Protocadherin-16 OS=Mus musculus OX=10090 GN=Dchs1 PE=1 SV=1 | JBrowse |
| Acropora florida | aflo_s0134.g9.t1 | XP_029199021.2 | protocadherin Fat 4-like [Acropora millepora] | Q9HC56 Protocadherin-9 OS=Homo sapiens OX=9606 GN=PCDH9 PE=1 SV=2 | JBrowse |
| Acropora gemmifera | agem_s0011.g34.t1 | XP_029199021.2 | protocadherin Fat 4-like [Acropora millepora] | Q9HC56 Protocadherin-9 OS=Homo sapiens OX=9606 GN=PCDH9 PE=1 SV=2 | JBrowse |
| Acropora hemprichii | Ahemp_017110-T1 | XP_015758033.1 | PREDICTED: protocadherin Fat 4-like [Acropora digitifera] | Q9HC56 Protocadherin-9 OS=Homo sapiens OX=9606 GN=PCDH9 PE=1 SV=2 | JBrowse |
| Acropora hemprichii | Ahemp_024448-T1 | XP_029199021.2 | protocadherin Fat 4-like [Acropora millepora] | Q9Y5F7 Protocadherin gamma-C4 OS=Homo sapiens OX=9606 GN=PCDHGC4 PE | JBrowse |
| Acropora hyacinthus | ahya_s0047.g73.t1 | XP_029199021.2 | protocadherin Fat 4-like [Acropora millepora] | Q9HC56 Protocadherin-9 OS=Homo sapiens OX=9606 GN=PCDH9 PE=1 SV=2 | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g20688 | KXJ17447.1 | Protocadherin Fat 4 [Exaiptasia diaphana] | Q2PZL6 Protocadherin Fat 4 OS=Mus musculus OX=10090 GN=Fat4 PE=1 SV | JBrowse |
| Acropora intermedia | aint_s0080.g47.t1 | XP_029199021.2 | protocadherin Fat 4-like [Acropora millepora] | Q9HC56 Protocadherin-9 OS=Homo sapiens OX=9606 GN=PCDH9 PE=1 SV=2 | JBrowse |
| Acropora intermedia | aint_s2958.g1.t1 | XP_015758033.1 | PREDICTED: protocadherin Fat 4-like [Acropora digitifera] | A7MB46 Protocadherin-18 OS=Bos taurus OX=9913 GN=PCDH18 PE=2 SV=1 | JBrowse |
| Actinoscyphia liui | gene05989.t1 | KXJ17447.1 | Protocadherin Fat 4 [Exaiptasia diaphana] | Q9Y5F7 Protocadherin gamma-C4 OS=Homo sapiens OX=9606 GN=PCDHGC4 PE | JBrowse |
| Acropora loripes | alor_g10820.t1 | XP_029199021.2 | protocadherin Fat 4-like [Acropora millepora] | Q9HC56 Protocadherin-9 OS=Homo sapiens OX=9606 GN=PCDH9 PE=1 SV=2 | JBrowse |
| Actinia mediterranea | ENSQPTP00000030356.1 | XP_031569953.1 | protocadherin-19-like [Actinia tenebrosa] | E9PVD3 Protocadherin-16 OS=Mus musculus OX=10090 GN=Dchs1 PE=1 SV=1 | JBrowse |
| Actinia mediterranea | ENSQPTP00000070317.1 | XP_031569953.1 | protocadherin-19-like [Actinia tenebrosa] | E9PVD3 Protocadherin-16 OS=Mus musculus OX=10090 GN=Dchs1 PE=1 SV=1 | JBrowse |
| Acropora microphthalma | amic_s0090.g17.t1 | XP_029199021.2 | protocadherin Fat 4-like [Acropora millepora] | Q9HC56 Protocadherin-9 OS=Homo sapiens OX=9606 GN=PCDH9 PE=1 SV=2 | JBrowse |
