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Support counts the member genes carrying the term. % of genes is that count over all 293 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR13931 | UBIQUITINATION FACTOR E4 | 244 / 293 | 83.3% | 99.6% of 245 | ≥80% support |
| GO | GO:0005737 Cellular Component | cytoplasm | 245 / 293 | 83.6% | 100.0% of 245 | ≥80% support |
| GO | GO:0000151 Cellular Component | ubiquitin ligase complex | 244 / 293 | 83.3% | 99.6% of 245 | ≥80% support |
| GO | GO:0000209 Biological Process | protein polyubiquitination | 244 / 293 | 83.3% | 99.6% of 245 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 244 / 293 | 83.3% | 99.6% of 245 | ≥80% support |
| GO | GO:0030433 Biological Process | obsolete ubiquitin-dependent ERAD pathway | 244 / 293 | 83.3% | 99.6% of 245 | ≥80% support |
| GO | GO:0034450 Molecular Function | ubiquitin-ubiquitin ligase activity | 244 / 293 | 83.3% | 99.6% of 245 | ≥80% support |
| GO | GO:0036503 Biological Process | ERAD pathway | 244 / 293 | 83.3% | 99.6% of 245 | ≥80% support |
| GO | GO:0016567 Biological Process | protein ubiquitination | 238 / 293 | 81.2% | 97.1% of 245 | ≥80% support |
| Pfam | PF10408 | Ufd2P_core — Ubiquitin elongating factor core | 232 / 293 | 79.2% | 96.7% of 240 | ≥50% support |
| Pfam | PF04564 | U-box | 205 / 293 | 70.0% | 85.4% of 240 | ≥50% support |
| GO | GO:0006511 Biological Process | ubiquitin-dependent protein catabolic process | 232 / 293 | 79.2% | 94.7% of 245 | ≥50% support |
| GO | GO:0004842 Molecular Function | ubiquitin-protein transferase activity | 206 / 293 | 70.3% | 84.1% of 245 | ≥50% support |
| KEGG | K10596 | UBE4A — Ubiquitin system | 152 / 293 | 51.9% | 91.0% of 167 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Calvadosia cruxmelitensis | g26.t1 | MAB13382.1 | S9 family peptidase [Parvibaculum sp.] | O07834 Dipeptidyl aminopeptidase BI OS=Pseudoxanthomonas mexicana O | JBrowse |
| Calvadosia cruxmelitensis | g28.t1 | WP_097279589.1 | penicillin-binding protein 2 [Caenispirillum bisanense] | A0A0H3C7V4 Cell shape-determining protein MreB OS=Caulobacter vibrioide | JBrowse |
| Calvadosia cruxmelitensis | g875.t1 | PCI28766.1 | DNA-directed RNA polymerase subunit beta' [SAR324 cluster bacterium] | Q39Y12 DNA-directed RNA polymerase subunit beta' OS=Geobacter metal | JBrowse |
