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This orthogroup contains 265 genes from 147 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 265 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR11246 | PRE-MRNA SPLICING FACTOR | 234 / 265 | 88.3% | 99.2% of 236 | ≥80% support |
| Pfam | PF02184 | HAT | 214 / 265 | 80.8% | 97.3% of 220 | ≥80% support |
| GO | GO:0005515 Molecular Function | protein binding | 235 / 265 | 88.7% | 99.6% of 236 | ≥80% support |
| GO | GO:0000245 Biological Process | spliceosomal complex assembly | 234 / 265 | 88.3% | 99.2% of 236 | ≥80% support |
| GO | GO:0000398 Biological Process | mRNA splicing, via spliceosome | 234 / 265 | 88.3% | 99.2% of 236 | ≥80% support |
| GO | GO:0000974 Cellular Component | Prp19 complex | 234 / 265 | 88.3% | 99.2% of 236 | ≥80% support |
| GO | GO:0071007 Cellular Component | U2-type catalytic step 2 spliceosome | 234 / 265 | 88.3% | 99.2% of 236 | ≥80% support |
| GO | GO:0071011 Cellular Component | precatalytic spliceosome | 234 / 265 | 88.3% | 99.2% of 236 | ≥80% support |
| GO | GO:0071014 Cellular Component | post-mRNA release spliceosomal complex | 234 / 265 | 88.3% | 99.2% of 236 | ≥80% support |
| GO | GO:0006396 Biological Process | RNA processing | 233 / 265 | 87.9% | 98.7% of 236 | ≥80% support |
| KEGG | K12869 | CRN, CRNKL1, CLF1, SYF3 — Chromosome and associated proteins | 202 / 265 | 76.2% | 97.6% of 207 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Calvadosia cruxmelitensis | g406.t1 | XP_047138925.1 | tubulin polymerization-promoting protein family member 2-like [Hydra vulgaris] | Q4R3A0 Tubulin polymerization-promoting protein family member 2 OS= | JBrowse |
| Calvadosia cruxmelitensis | g824.t1 | XP_019639861.1 | PREDICTED: NEDD8-conjugating enzyme Ubc12 [Branchiostoma belcheri] | Q6DCZ9 NEDD8-conjugating enzyme Ubc12 OS=Xenopus laevis OX=8355 GN= | JBrowse |
