Gene Family

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Orthogroup

OG0008900

View gene tree Interactive tree, one tip per member sequence
Member genes
167
Species
131
Sequences
167
Best annotation support
85.0%
Downloads ⬇ Alignment (FASTA.gz) ⬇ Sequences (FASTA)

Consensus functional annotation

No term is shared by every member gene — the best-supported term below covers 85.0% of the 167 members.

Support counts the member genes carrying the term. % of genes is that count over all 167 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.

Source Term Name / description Support % of genes % annotated Consistency
PANTHERPTHR31148U1 SMALL NUCLEAR RIBONUCLEOPROTEIN C142 / 16785.0%98.6%
of 144		≥80% support
PfamPF06220zf-U1 — U1 zinc finger144 / 16786.2%100.0%
of 144		≥80% support
GOGO:0000387
Biological Process		spliceosomal snRNP assembly144 / 16786.2%100.0%
of 144		≥80% support
GOGO:0000398
Biological Process		mRNA splicing, via spliceosome144 / 16786.2%100.0%
of 144		≥80% support
GOGO:0005685
Cellular Component		U1 snRNP144 / 16786.2%100.0%
of 144		≥80% support
GOGO:0008270
Molecular Function		zinc ion binding144 / 16786.2%100.0%
of 144		≥80% support
GOGO:0000395
Biological Process		mRNA 5'-splice site recognition142 / 16785.0%98.6%
of 144		≥80% support
GOGO:0030627
Molecular Function		pre-mRNA 5'-splice site binding142 / 16785.0%98.6%
of 144		≥80% support
GOGO:0003676
Molecular Function		nucleic acid binding133 / 16779.6%92.4%
of 144		≥50% support
GOGO:0005634
Cellular Component		nucleus133 / 16779.6%92.4%
of 144		≥50% support
KEGGK11095SNRPC — Spliceosome120 / 16771.9%100.0%
of 120		≥50% support
📊 Total members in OG0008900: 1 (filtered to CSP1 · show all species)
Show: genes per page

Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.

Species Gene ID Top NCBI-NR hit
(accession)		 Top NCBI-NR hit description
(source organism)		 Top UniProt hit
(Swiss-Prot)		 Genome browser
Chrysogorgia sp. JL179-B06Csp0G486640none–JBrowse
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