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Support counts the member genes carrying the term. % of genes is that count over all 536 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR23355 | RIBONUCLEASE | 441 / 536 | 82.3% | 98.9% of 446 | ≥80% support |
| GO | GO:0000175 Molecular Function | 3'-5'-RNA exonuclease activity | 441 / 536 | 82.3% | 98.9% of 446 | ≥80% support |
| Pfam | PF00773 | RNB | 394 / 536 | 73.5% | 88.5% of 445 | ≥50% support |
| Pfam | PF17849 | OB_Dis3 — Dis3-like cold-shock domain 2 (CSD2) | 338 / 536 | 63.1% | 76.0% of 445 | ≥50% support |
| Pfam | PF17215 | Rrp44_S1 — S1 domain | 312 / 536 | 58.2% | 70.1% of 445 | ≥50% support |
| Pfam | PF17216 | Rrp44_CSD1 — Rrp44-like cold shock domain | 302 / 536 | 56.3% | 67.9% of 445 | ≥50% support |
| GO | GO:0000177 Cellular Component | cytoplasmic exosome (RNase complex) | 421 / 536 | 78.5% | 94.4% of 446 | ≥50% support |
| GO | GO:0016075 Biological Process | rRNA catabolic process | 421 / 536 | 78.5% | 94.4% of 446 | ≥50% support |
| GO | GO:0003723 Molecular Function | RNA binding | 394 / 536 | 73.5% | 88.3% of 446 | ≥50% support |
| GO | GO:0004540 Molecular Function | RNA nuclease activity | 394 / 536 | 73.5% | 88.3% of 446 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Hydra oligactis | HOLI00002.G21541 | MBI3520783.1 | ribonuclease R [Bacteroidota bacterium] | O32231 Ribonuclease R OS=Bacillus subtilis (strain 168) OX=224308 G | JBrowse |
| Hydra oligactis | HOLI00059.G26430 | WP_105259718.1 | ribonuclease R [Rhodoferax sp. TS-BS-61-7] | P44907 Ribonuclease R OS=Haemophilus influenzae (strain ATCC 51907 | JBrowse |
| Hydra oligactis | HOLI00059.G26431 | WP_105259718.1 | ribonuclease R [Rhodoferax sp. TS-BS-61-7] | P21499 Ribonuclease R OS=Escherichia coli (strain K12) OX=83333 GN= | JBrowse |
| Hydra oligactis | HOLI00152.G8176 | XP_047139511.1 | DIS3-like exonuclease 1 [Hydra vulgaris] | A0JN80 DIS3-like exonuclease 1 OS=Bos taurus OX=9913 GN=DIS3L PE=2 | JBrowse |
| Hydra oligactis | HOLI00264.G3308 | WP_094287812.1 | ribonuclease R [Acidovorax kalamii] | P54084 Ribonuclease R (Fragment) OS=Acidithiobacillus ferrooxidans | JBrowse |
| Hydra oligactis | HOLI00264.G3309 | MBN9627697.1 | ribonuclease R [Acidovorax sp.] | P44907 Ribonuclease R OS=Haemophilus influenzae (strain ATCC 51907 | JBrowse |
| Hydra oligactis | HOLI00573.G11317 | XP_012556041.2 | exosome complex exonuclease RRP44 [Hydra vulgaris] | Q9Y2L1 Exosome complex exonuclease RRP44 OS=Homo sapiens OX=9606 GN | JBrowse |
| Hydra oligactis | HOLI00967.G28564 | XP_047139511.1 | DIS3-like exonuclease 1 [Hydra vulgaris] | – | JBrowse |
| Hydra oligactis | HOLI00967.G28565 | XP_047139511.1 | DIS3-like exonuclease 1 [Hydra vulgaris] | A0JN80 DIS3-like exonuclease 1 OS=Bos taurus OX=9913 GN=DIS3L PE=2 | JBrowse |
| Hydra oligactis | HOLI01031.G13030 | OGP01658.1 | MAG: ribonuclease II [Curvibacter sp. GWA2_63_95] | Q9KNY1 Ribonuclease R OS=Vibrio cholerae serotype O1 (strain ATCC 3 | JBrowse |
| Hydra oligactis | HOLI01298.G15106 | WP_208933354.1 | ribonuclease R [Rheinheimera sp. F8] | P21499 Ribonuclease R OS=Escherichia coli (strain K12) OX=83333 GN= | JBrowse |
