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Support counts the member genes carrying the term. % of genes is that count over all 2,277 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00058 | Ldl_recept_b — Low-density lipoprotein receptor repeat class B | 1757 / 2,277 | 77.2% | 92.7% of 1,895 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Leptogorgia sarmentosa | ENSAPQP00000001378.1 | CAB3985358.1 | low-density lipo receptor-related 4-like isoform X1 [Paramuricea clavata] | G3V928 Prolow-density lipoprotein receptor-related protein 1 OS=Rat | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000002114.1 | CAB3997891.1 | inositol 1,4,5-trisphosphate receptor-like, partial [Paramuricea clavata] | Q9QYP1 Low-density lipoprotein receptor-related protein 4 OS=Rattus | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000002127.1 | XP_028407153.1 | low-density lipoprotein receptor-related protein 4-like [Dendronephthya gigantea] | Q9QYP1 Low-density lipoprotein receptor-related protein 4 OS=Rattus | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000003361.1 | CAB3985358.1 | low-density lipo receptor-related 4-like isoform X1 [Paramuricea clavata] | G3V928 Prolow-density lipoprotein receptor-related protein 1 OS=Rat | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000003391.1 | CAB3985358.1 | low-density lipo receptor-related 4-like isoform X1 [Paramuricea clavata] | G3V928 Prolow-density lipoprotein receptor-related protein 1 OS=Rat | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000003402.1 | CAB3985358.1 | low-density lipo receptor-related 4-like isoform X1 [Paramuricea clavata] | G3V928 Prolow-density lipoprotein receptor-related protein 1 OS=Rat | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000004748.1 | CAB4040202.1 | Hypothetical predicted protein, partial [Paramuricea clavata] | O88572 Low-density lipoprotein receptor-related protein 6 OS=Mus mu | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000005715.1 | CAB3985358.1 | low-density lipo receptor-related 4-like isoform X1 [Paramuricea clavata] | A2ARV4 Low-density lipoprotein receptor-related protein 2 OS=Mus mu | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000014372.1 | CAB3988720.1 | very low-density lipo receptor-like isoform X2 [Paramuricea clavata] | – | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000015399.1 | CAB3988720.1 | very low-density lipo receptor-like isoform X2 [Paramuricea clavata] | P98158 Low-density lipoprotein receptor-related protein 2 OS=Rattus | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000016262.1 | CAB3988720.1 | very low-density lipo receptor-like isoform X2 [Paramuricea clavata] | P98158 Low-density lipoprotein receptor-related protein 2 OS=Rattus | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000016275.1 | CAB3988720.1 | very low-density lipo receptor-like isoform X2 [Paramuricea clavata] | P98158 Low-density lipoprotein receptor-related protein 2 OS=Rattus | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000016291.1 | CAB3988720.1 | very low-density lipo receptor-like isoform X2 [Paramuricea clavata] | P98158 Low-density lipoprotein receptor-related protein 2 OS=Rattus | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000017403.1 | CAB3988720.1 | very low-density lipo receptor-like isoform X2 [Paramuricea clavata] | P35950 Low-density lipoprotein receptor OS=Cricetulus griseus OX=10 | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000018977.1 | CAB3988720.1 | very low-density lipo receptor-like isoform X2 [Paramuricea clavata] | P01131 Low-density lipoprotein receptor OS=Bos taurus OX=9913 GN=LD | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000018986.1 | CAB3988720.1 | very low-density lipo receptor-like isoform X2 [Paramuricea clavata] | P01131 Low-density lipoprotein receptor OS=Bos taurus OX=9913 GN=LD | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000022266.1 | XP_028404464.1 | low-density lipoprotein receptor-related protein 8-like [Dendronephthya gigantea] | C0HL13 Low-density lipoprotein receptor-related protein 2 OS=Sus sc | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000022401.1 | CAB4008631.1 | low-density lipo receptor-related 4, partial [Paramuricea clavata] | C0HL13 Low-density lipoprotein receptor-related protein 2 OS=Sus sc | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000022413.1 | CAB4008631.1 | low-density lipo receptor-related 4, partial [Paramuricea clavata] | C0HL13 Low-density lipoprotein receptor-related protein 2 OS=Sus sc | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000022422.1 | CAB4008631.1 | low-density lipo receptor-related 4, partial [Paramuricea clavata] | C0HL13 Low-density lipoprotein receptor-related protein 2 OS=Sus sc | JBrowse |
