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This orthogroup contains 197 genes from 141 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 197 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR13586 | SCD6 PROTEIN-RELATED | 171 / 197 | 86.8% | 99.4% of 172 | ≥80% support |
| Pfam | PF09532 | FDF | 160 / 197 | 81.2% | 93.6% of 171 | ≥80% support |
| GO | GO:0000932 Cellular Component | P-body | 170 / 197 | 86.3% | 99.4% of 171 | ≥80% support |
| GO | GO:0003729 Molecular Function | mRNA binding | 170 / 197 | 86.3% | 99.4% of 171 | ≥80% support |
| GO | GO:0033962 Biological Process | P-body assembly | 170 / 197 | 86.3% | 99.4% of 171 | ≥80% support |
| GO | GO:0034063 Biological Process | stress granule assembly | 170 / 197 | 86.3% | 99.4% of 171 | ≥80% support |
| Pfam | PF12701 | LSM14 — Scd6-like Sm domain | 145 / 197 | 73.6% | 84.8% of 171 | ≥50% support |
| GO | GO:0003723 Molecular Function | RNA binding | 138 / 197 | 70.1% | 80.7% of 171 | ≥50% support |
| KEGG | K18749 | LSM14, RAP55, SCD6 — Messenger RNA biogenesis | 134 / 197 | 68.0% | 96.4% of 139 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Leptogorgia sarmentosa | ENSAPQP00000010643.1 | CAB4002248.1 | Hypothetical predicted protein [Paramuricea clavata] | Q566L7 Protein LSM14 homolog B OS=Xenopus tropicalis OX=8364 GN=lsm | JBrowse |
| Leptogorgia sarmentosa | ENSAPQP00000010648.1 | CAB4002248.1 | Hypothetical predicted protein [Paramuricea clavata] | Q566L7 Protein LSM14 homolog B OS=Xenopus tropicalis OX=8364 GN=lsm | JBrowse |
