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This orthogroup contains 197 genes from 141 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 197 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR13586 | SCD6 PROTEIN-RELATED | 171 / 197 | 86.8% | 99.4% of 172 | ≥80% support |
| Pfam | PF09532 | FDF | 160 / 197 | 81.2% | 93.6% of 171 | ≥80% support |
| GO | GO:0000932 Cellular Component | P-body | 170 / 197 | 86.3% | 99.4% of 171 | ≥80% support |
| GO | GO:0003729 Molecular Function | mRNA binding | 170 / 197 | 86.3% | 99.4% of 171 | ≥80% support |
| GO | GO:0033962 Biological Process | P-body assembly | 170 / 197 | 86.3% | 99.4% of 171 | ≥80% support |
| GO | GO:0034063 Biological Process | stress granule assembly | 170 / 197 | 86.3% | 99.4% of 171 | ≥80% support |
| Pfam | PF12701 | LSM14 — Scd6-like Sm domain | 145 / 197 | 73.6% | 84.8% of 171 | ≥50% support |
| GO | GO:0003723 Molecular Function | RNA binding | 138 / 197 | 70.1% | 80.7% of 171 | ≥50% support |
| KEGG | K18749 | LSM14, RAP55, SCD6 — Messenger RNA biogenesis | 134 / 197 | 68.0% | 96.4% of 139 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora acuminata | aacu_s0024.g72.t1 | XP_015766899.1 | PREDICTED: protein LSM14 homolog A-A-like [Acropora digitifera] | A0A8M2 Protein LSM14 homolog A-A OS=Xenopus laevis OX=8355 GN=lsm14 | JBrowse |
| Alatina alata | Aala_g152.t1 | XP_015780813.1 | PREDICTED: uncharacterized protein LOC107358739 [Acropora digitifera] | Q95SX7 Probable RNA-directed DNA polymerase from transposon BS OS=D | JBrowse |
| Alatina alata | Aala_g1984.t1 | MCP5002498.1 | hypothetical protein [Planctomycetota bacterium] | A7SLW1 Branched-chain-amino-acid aminotransferase OS=Nematostella v | JBrowse |
| Aurelia aurita | scaffold64.g36.t1 | none | – | JBrowse | |
| Aurelia aurita complex sp. Pacific | scaffold386.g6.t1 | none | – | JBrowse | |
| Acropora austera | ENSKKQP00000029333.1 | XP_015766899.1 | PREDICTED: protein LSM14 homolog A-A-like [Acropora digitifera] | Q6NVR8 Protein LSM14 homolog A OS=Xenopus tropicalis OX=8364 GN=lsm | JBrowse |
| Acropora austera | ENSKKQP00000029340.1 | XP_015766899.1 | PREDICTED: protein LSM14 homolog A-A-like [Acropora digitifera] | Q6NVR8 Protein LSM14 homolog A OS=Xenopus tropicalis OX=8364 GN=lsm | JBrowse |
| Acropora awi | aawi_s0370.g9.t1 | XP_015766899.1 | PREDICTED: protein LSM14 homolog A-A-like [Acropora digitifera] | A0A8M2 Protein LSM14 homolog A-A OS=Xenopus laevis OX=8355 GN=lsm14 | JBrowse |
| Acropora cervicornis | KAK2550026.1 | XP_015766899.1 | PREDICTED: protein LSM14 homolog A-A-like [Acropora digitifera] | Q6NVR8 Protein LSM14 homolog A OS=Xenopus tropicalis OX=8364 GN=lsm | JBrowse |
| Acropora cytherea | acyt_s0429.g17.t1 | XP_015766899.1 | PREDICTED: protein LSM14 homolog A-A-like [Acropora digitifera] | Q8K2F8 Protein LSM14 homolog A OS=Mus musculus OX=10090 GN=Lsm14a P | JBrowse |
| Acropora digitifera | chr4Alt.g7869.t1 | none | – | JBrowse | |
| Acropora echinata | aech_s0085.g39.t1 | XP_015766899.1 | PREDICTED: protein LSM14 homolog A-A-like [Acropora digitifera] | A0A8M2 Protein LSM14 homolog A-A OS=Xenopus laevis OX=8355 GN=lsm14 | JBrowse |
| Actinia equina | EGACTEQ4350014416-PA | XP_031570367.1 | protein LSM14 homolog A-like [Actinia tenebrosa] | Q8CGC4 Protein LSM14 homolog B OS=Mus musculus OX=10090 GN=Lsm14b P | JBrowse |
| Actinia equina | EGACTEQ4350014416-PB | XP_031570367.1 | protein LSM14 homolog A-like [Actinia tenebrosa] | Q6NVR8 Protein LSM14 homolog A OS=Xenopus tropicalis OX=8364 GN=lsm | JBrowse |
| Actinia equina | EGACTEQ4350014416-PC | XP_031570367.1 | protein LSM14 homolog A-like [Actinia tenebrosa] | Q8CGC4 Protein LSM14 homolog B OS=Mus musculus OX=10090 GN=Lsm14b P | JBrowse |
| Acropora florida | aflo_s0203.g61.t1 | XP_015766899.1 | PREDICTED: protein LSM14 homolog A-A-like [Acropora digitifera] | A0A8M2 Protein LSM14 homolog A-A OS=Xenopus laevis OX=8355 GN=lsm14 | JBrowse |
| Acropora gemmifera | agem_s0026.g37.t1 | XP_015766899.1 | PREDICTED: protein LSM14 homolog A-A-like [Acropora digitifera] | A0A8M2 Protein LSM14 homolog A-A OS=Xenopus laevis OX=8355 GN=lsm14 | JBrowse |
| Acropora hemprichii | Ahemp_009208-T1 | XP_015766899.1 | PREDICTED: protein LSM14 homolog A-A-like [Acropora digitifera] | Q6NVR8 Protein LSM14 homolog A OS=Xenopus tropicalis OX=8364 GN=lsm | JBrowse |
| Acropora hyacinthus | ahya_s0204.g12.t1 | XP_015766899.1 | PREDICTED: protein LSM14 homolog A-A-like [Acropora digitifera] | A0A8M2 Protein LSM14 homolog A-A OS=Xenopus laevis OX=8355 GN=lsm14 | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g24719 | KXJ24245.1 | Protein LSM14-like A [Exaiptasia diaphana] | Q3MHF8 Protein LSM14 homolog A OS=Bos taurus OX=9913 GN=LSM14A PE=2 | JBrowse |
