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This orthogroup contains 1,580 genes from 146 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 1,580 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR45636 | PAIRED BOX PROTEIN PAX-6-RELATED-RELATED | 1433 / 1,580 | 90.7% | 98.1% of 1,461 | ≥80% support |
| Pfam | PF00292 | PAX — 'Paired box' domain | 1431 / 1,580 | 90.6% | 97.9% of 1,462 | ≥80% support |
| GO | GO:0003677 Molecular Function | DNA binding | 1463 / 1,580 | 92.6% | 100.0% of 1,463 | ≥80% support |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 1456 / 1,580 | 92.2% | 99.5% of 1,463 | ≥80% support |
| GO | GO:0000981 Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | 1289 / 1,580 | 81.6% | 88.1% of 1,463 | ≥80% support |
| Pfam | PF00046 | Homeodomain | 1117 / 1,580 | 70.7% | 76.4% of 1,462 | ≥50% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 1015 / 1,580 | 64.2% | 69.4% of 1,463 | ≥50% support |
| GO | GO:0000978 Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | 1003 / 1,580 | 63.5% | 68.6% of 1,463 | ≥50% support |
| GO | GO:0048856 Biological Process | anatomical structure development | 986 / 1,580 | 62.4% | 67.4% of 1,463 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Leptoseris scabra | ANN01065-RA | XP_020630078.1 | paired box protein Pax-3-like [Orbicella faveolata] | Q645N4 Paired box protein Pax-3-A OS=Xenopus laevis OX=8355 GN=pax3 | JBrowse |
| Leptoseris scabra | ANN01067-RA | XP_020630062.1 | paired box protein Pax-3-B-like [Orbicella faveolata] | P47239 Paired box protein Pax-7 OS=Mus musculus OX=10090 GN=Pax7 PE | JBrowse |
| Leptoseris scabra | ANN01068-RA | KAJ7365694.1 | Paired box protein Pax-3 [Desmophyllum pertusum] | Q0IH87 Paired box protein Pax-3-B OS=Xenopus laevis OX=8355 GN=pax3 | JBrowse |
| Leptoseris scabra | ANN01075-RA | XP_015773690.1 | PREDICTED: paired box protein Pax-3-B-like [Acropora digitifera] | P09082 Protein gooseberry OS=Drosophila melanogaster OX=7227 GN=gsb | JBrowse |
| Leptoseris scabra | ANN01076-RA | XP_015773704.1 | PREDICTED: paired box protein Pax-3-B-like [Acropora digitifera] | Q0IH87 Paired box protein Pax-3-B OS=Xenopus laevis OX=8355 GN=pax3 | JBrowse |
| Leptoseris scabra | ANN01077-RA | XP_029211518.2 | paired box protein Pax-3-B-like [Acropora millepora] | P23760 Paired box protein Pax-3 OS=Homo sapiens OX=9606 GN=PAX3 PE= | JBrowse |
| Leptoseris scabra | ANN01078-RA | XP_027040208.1 | paired box protein Pax-3-like [Pocillopora damicornis] | Q645N4 Paired box protein Pax-3-A OS=Xenopus laevis OX=8355 GN=pax3 | JBrowse |
| Leptoseris scabra | ANN15718-RA | RMX60007.1 | hypothetical protein pdam_00019316 [Pocillopora damicornis] | Q90268 Paired box protein Pax-2a OS=Danio rerio OX=7955 GN=pax2a PE | JBrowse |
| Leptoseris scabra | ANN22891-RA | XP_044176270.1 | LOW QUALITY PROTEIN: barH-like 2 homeobox protein [Acropora millepora] | P26630 Paired box protein Pax-6 OS=Danio rerio OX=7955 GN=pax6a PE= | JBrowse |
| Leptoseris scabra | ANN23914-RA | XP_020603228.1 | paired box protein Pax-6-like isoform X1 [Orbicella faveolata] | Q1LZF1 Paired box protein Pax-6 OS=Bos taurus OX=9913 GN=PAX6 PE=2 | JBrowse |
