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This orthogroup contains 214 genes from 136 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 214 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR23328 | UNCHARACTERIZED | 167 / 214 | 78.0% | 99.4% of 168 | ≥50% support |
| Pfam | PF00097 | zf-C3HC4 — Zinc finger, C3HC4 type (RING finger) | 132 / 214 | 61.7% | 89.8% of 147 | ≥50% support |
| GO | GO:0005634 Cellular Component | nucleus | 168 / 214 | 78.5% | 100.0% of 168 | ≥50% support |
| GO | GO:0004842 Molecular Function | ubiquitin-protein transferase activity | 167 / 214 | 78.0% | 99.4% of 168 | ≥50% support |
| GO | GO:0006302 Biological Process | double-strand break repair | 167 / 214 | 78.0% | 99.4% of 168 | ≥50% support |
| GO | GO:0031491 Molecular Function | nucleosome binding | 167 / 214 | 78.0% | 99.4% of 168 | ≥50% support |
| GO | GO:0035861 Cellular Component | site of double-strand break | 167 / 214 | 78.0% | 99.4% of 168 | ≥50% support |
| GO | GO:0046872 Molecular Function | metal ion binding | 132 / 214 | 61.7% | 78.6% of 168 | ≥50% support |
| KEGG | K20779 | RNF168 — DNA repair and recombination proteins | 116 / 214 | 54.2% | 98.3% of 118 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Leptoseris scabra | ANN27097-RA | XP_029213933.2 | E3 ubiquitin-protein ligase rnf168-like [Acropora millepora] | Q7T308 E3 ubiquitin-protein ligase rnf168 OS=Danio rerio OX=7955 GN | JBrowse |
