← Back to the gene family browser
Support counts the member genes carrying the term. % of genes is that count over all 6,131 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00046 | Homeodomain | 5534 / 6,131 | 90.3% | 100.0% of 5,537 | ≥80% support |
| GO | GO:0003677 Molecular Function | DNA binding | 5541 / 6,131 | 90.4% | 99.9% of 5,546 | ≥80% support |
| GO | GO:0000981 Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | 5489 / 6,131 | 89.5% | 99.0% of 5,546 | ≥80% support |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 5411 / 6,131 | 88.3% | 97.6% of 5,546 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 4181 / 6,131 | 68.2% | 75.4% of 5,546 | ≥50% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 4143 / 6,131 | 67.6% | 74.7% of 5,546 | ≥50% support |
| GO | GO:0000978 Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | 3711 / 6,131 | 60.5% | 66.9% of 5,546 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Orbicella faveolata | XP_020600713.1 | XP_020600713.1 | homeobox protein ceh-19-like [Orbicella faveolata] | P26797 Homeobox protein ceh-19 OS=Caenorhabditis elegans OX=6239 GN | JBrowse |
| Orbicella faveolata | XP_020601902.1 | XP_020601902.1 | homeobox protein MSH-D-like [Orbicella faveolata] | P15857 Homeobox protein H17 (Fragment) OS=Apis mellifera OX=7460 PE | JBrowse |
| Orbicella faveolata | XP_020602382.1 | XP_020602382.1 | homeobox protein ceh-30-like [Orbicella faveolata] | Q9UMQ3 Homeobox protein BarH-like 2 OS=Homo sapiens OX=9606 GN=BARX | JBrowse |
| Orbicella faveolata | XP_020610052.1 | XP_020610052.1 | homeobox protein Hox-D3a-like [Orbicella faveolata] | Q804S6 Homeobox protein EMX1 OS=Danio rerio OX=7955 GN=emx1 PE=2 SV | JBrowse |
| Orbicella faveolata | XP_020612074.1 | XP_020612074.1 | homeobox protein Hox-B3-like [Orbicella faveolata] | P10179 Homeobox protein HB4 (Fragment) OS=Tripneustes gratilla OX=7 | JBrowse |
| Orbicella faveolata | XP_020612075.1 | XP_020612075.1 | GS homeobox 1-like [Orbicella faveolata] | Q9H4S2 GS homeobox 1 OS=Homo sapiens OX=9606 GN=GSX1 PE=1 SV=1 | JBrowse |
| Orbicella faveolata | XP_020612076.1 | XP_020612075.1 | GS homeobox 1-like [Orbicella faveolata] | Q9H4S2 GS homeobox 1 OS=Homo sapiens OX=9606 GN=GSX1 PE=1 SV=1 | JBrowse |
| Orbicella faveolata | XP_020612691.1 | XP_020612691.1 | homeobox protein notochord-like [Orbicella faveolata] | Q91770 Homeobox protein not2 OS=Xenopus laevis OX=8355 GN=not2 PE=2 | JBrowse |
| Orbicella faveolata | XP_020612724.1 | XP_020612724.1 | homeobox protein ceh-30-like [Orbicella faveolata] | Q6GLB9 Homeobox protein EMX1 OS=Xenopus tropicalis OX=8364 GN=emx1 | JBrowse |
| Orbicella faveolata | XP_020612877.1 | XP_020612877.1 | homeobox protein ceh-13-like isoform X1 [Orbicella faveolata] | P10181 Homeobox protein rough OS=Drosophila melanogaster OX=7227 GN | JBrowse |
| Orbicella faveolata | XP_020612878.1 | XP_020612878.1 | homeobox protein ceh-13-like isoform X2 [Orbicella faveolata] | P10181 Homeobox protein rough OS=Drosophila melanogaster OX=7227 GN | JBrowse |
| Orbicella faveolata | XP_020613618.1 | XP_020613618.1 | homeobox protein not2-like [Orbicella faveolata] | P43345 T-cell leukemia homeobox protein 1 OS=Mus musculus OX=10090 | JBrowse |
| Orbicella faveolata | XP_020613918.1 | XP_020613918.1 | T-cell leukemia homeobox protein 2-like [Orbicella faveolata] | P26797 Homeobox protein ceh-19 OS=Caenorhabditis elegans OX=6239 GN | JBrowse |
| Orbicella faveolata | XP_020614135.1 | XP_020614135.1 | homeobox protein slou-like [Orbicella faveolata] | Q75W95 NK1 transcription factor-related protein 1 OS=Danio rerio OX | JBrowse |
| Orbicella faveolata | XP_020614177.1 | XP_020614177.1 | T-cell leukemia homeobox protein 3-like isoform X1 [Orbicella faveolata] | P26797 Homeobox protein ceh-19 OS=Caenorhabditis elegans OX=6239 GN | JBrowse |
| Orbicella faveolata | XP_020614248.1 | XP_020614248.1 | homeobox protein Hox-B7-B-like isoform X2 [Orbicella faveolata] | P26797 Homeobox protein ceh-19 OS=Caenorhabditis elegans OX=6239 GN | JBrowse |
| Orbicella faveolata | XP_020614252.1 | XP_020614252.1 | ventral anterior homeobox 1-like [Orbicella faveolata] | Q91770 Homeobox protein not2 OS=Xenopus laevis OX=8355 GN=not2 PE=2 | JBrowse |
| Orbicella faveolata | XP_020614306.1 | XP_020614306.1 | NK1 transcription factor-related protein 2-like [Orbicella faveolata] | Q91770 Homeobox protein not2 OS=Xenopus laevis OX=8355 GN=not2 PE=2 | JBrowse |
| Orbicella faveolata | XP_020614313.1 | XP_020614313.1 | homeobox protein MOX-2-like [Orbicella faveolata] | Q91770 Homeobox protein not2 OS=Xenopus laevis OX=8355 GN=not2 PE=2 | JBrowse |
| Orbicella faveolata | XP_020614324.1 | XP_020614324.1 | homeobox protein HMX3-A-like [Orbicella faveolata] | O57601 Homeobox protein HMX3 OS=Gallus gallus OX=9031 GN=HMX3 PE=2 | JBrowse |
